Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx4P53776 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx4P53776 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lhx4P53776 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lhx4P53776 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx4P53776 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.15■□□□□ 0.5
Lhx4P53776 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx4P53776 Gm10420-201ENSMUST00000121713 882 ntBASIC18.15■□□□□ 0.5
Lhx4P53776 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx4P53776 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx4P53776 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lhx4P53776 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Lhx4P53776 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Lhx4P53776 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lhx4P53776 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Lhx4P53776 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx4P53776 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx4P53776 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.14■□□□□ 0.49
Lhx4P53776 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx4P53776 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.14■□□□□ 0.49
Lhx4P53776 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Lhx4P53776 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx4P53776 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx4P53776 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.14■□□□□ 0.49
Lhx4P53776 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx4P53776 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx4P53776 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Lhx4P53776 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx4P53776 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx4P53776 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx4P53776 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Lhx4P53776 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Lhx4P53776 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx4P53776 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Lhx4P53776 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx4P53776 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx4P53776 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx4P53776 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx4P53776 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx4P53776 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx4P53776 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.11■□□□□ 0.49
Lhx4P53776 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.11■□□□□ 0.49
Lhx4P53776 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx4P53776 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx4P53776 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx4P53776 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx4P53776 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx4P53776 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx4P53776 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx4P53776 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Lhx4P53776 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx4P53776 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx4P53776 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx4P53776 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx4P53776 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Lhx4P53776 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx4P53776 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx4P53776 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.09■□□□□ 0.49
Lhx4P53776 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx4P53776 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx4P53776 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx4P53776 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Lhx4P53776 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Lhx4P53776 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Lhx4P53776 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Lhx4P53776 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx4P53776 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx4P53776 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx4P53776 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
Lhx4P53776 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.07■□□□□ 0.48
Lhx4P53776 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Lhx4P53776 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx4P53776 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx4P53776 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx4P53776 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx4P53776 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Lhx4P53776 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx4P53776 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Lhx4P53776 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx4P53776 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx4P53776 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.06■□□□□ 0.48
Lhx4P53776 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx4P53776 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx4P53776 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.06■□□□□ 0.48
Lhx4P53776 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx4P53776 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx4P53776 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx4P53776 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx4P53776 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Lhx4P53776 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx4P53776 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx4P53776 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx4P53776 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Lhx4P53776 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx4P53776 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Lhx4P53776 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx4P53776 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx4P53776 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Lhx4P53776 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx4P53776 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms