Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox18P43680 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox18P43680 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.78■□□□□ 0.92
Sox18P43680 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox18P43680 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox18P43680 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox18P43680 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox18P43680 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox18P43680 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Sox18P43680 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sox18P43680 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox18P43680 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox18P43680 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
Sox18P43680 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox18P43680 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.75■□□□□ 0.91
Sox18P43680 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.75■□□□□ 0.91
Sox18P43680 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sox18P43680 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sox18P43680 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.74■□□□□ 0.91
Sox18P43680 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox18P43680 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox18P43680 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sox18P43680 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox18P43680 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox18P43680 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox18P43680 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox18P43680 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox18P43680 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.73■□□□□ 0.91
Sox18P43680 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.73■□□□□ 0.91
Sox18P43680 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox18P43680 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Sox18P43680 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox18P43680 Golgb1-201ENSMUST00000023534 498 ntBASIC20.72■□□□□ 0.91
Sox18P43680 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox18P43680 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox18P43680 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.72■□□□□ 0.91
Sox18P43680 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox18P43680 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sox18P43680 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.71■□□□□ 0.91
Sox18P43680 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox18P43680 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Sox18P43680 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox18P43680 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox18P43680 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox18P43680 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sox18P43680 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox18P43680 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox18P43680 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox18P43680 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox18P43680 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.7■□□□□ 0.9
Sox18P43680 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Sox18P43680 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox18P43680 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox18P43680 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox18P43680 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox18P43680 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox18P43680 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox18P43680 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.69■□□□□ 0.9
Sox18P43680 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.69■□□□□ 0.9
Sox18P43680 Gm29257-201ENSMUST00000186115 639 ntBASIC20.69■□□□□ 0.9
Sox18P43680 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.69■□□□□ 0.9
Sox18P43680 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Sox18P43680 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox18P43680 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox18P43680 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox18P43680 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sox18P43680 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox18P43680 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.68■□□□□ 0.9
Sox18P43680 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sox18P43680 Gm10399-202ENSMUST00000202768 748 ntBASIC20.68■□□□□ 0.9
Sox18P43680 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Sox18P43680 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sox18P43680 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox18P43680 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
Sox18P43680 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Sox18P43680 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox18P43680 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sox18P43680 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox18P43680 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox18P43680 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sox18P43680 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox18P43680 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Sox18P43680 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.66■□□□□ 0.9
Sox18P43680 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox18P43680 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sox18P43680 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sox18P43680 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.65■□□□□ 0.9
Sox18P43680 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.65■□□□□ 0.9
Sox18P43680 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Sox18P43680 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox18P43680 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Sox18P43680 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox18P43680 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sox18P43680 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.64■□□□□ 0.9
Sox18P43680 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Sox18P43680 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.64■□□□□ 0.89
Sox18P43680 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox18P43680 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.64■□□□□ 0.89
Sox18P43680 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Sox18P43680 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms