Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YEH1YLL012W 1722 nt5.88□□□□□ -1.47
TDA11P38854 RRP46YGR095C 672 nt5.88□□□□□ -1.47
TDA11P38854 YNR040WYNR040W 771 nt5.88□□□□□ -1.47
TDA11P38854 SGF29YCL010C 780 nt5.88□□□□□ -1.47
TDA11P38854 RAD3YER171W 2337 nt5.88□□□□□ -1.47
TDA11P38854 YPL277CYPL277C 1464 nt5.88□□□□□ -1.47
TDA11P38854 RGT1YKL038W 3513 nt5.87□□□□□ -1.47
TDA11P38854 SRL2YLR082C 1179 nt5.87□□□□□ -1.47
TDA11P38854 RFA1YAR007C 1866 nt5.87□□□□□ -1.47
TDA11P38854 ENT2YLR206W 1842 nt5.86□□□□□ -1.47
TDA11P38854 CST6YIL036W 1764 nt5.86□□□□□ -1.47
TDA11P38854 PPT1YGR123C 1542 nt5.86□□□□□ -1.47
TDA11P38854 UIP5YKR044W 1332 nt5.86□□□□□ -1.47
TDA11P38854 YJL193WYJL193W 1209 nt5.86□□□□□ -1.47
TDA11P38854 GTO3YMR251W 1101 nt5.86□□□□□ -1.47
TDA11P38854 HSP78YDR258C 2436 nt5.86□□□□□ -1.47
TDA11P38854 CRZ1YNL027W 2037 nt5.86□□□□□ -1.47
TDA11P38854 GYP8YFL027C 1494 nt5.85□□□□□ -1.47
TDA11P38854 MED6YHR058C 888 nt5.85□□□□□ -1.47
TDA11P38854 RNH201YNL072W 924 nt5.85□□□□□ -1.47
TDA11P38854 MRPL10YNL284C 969 nt5.85□□□□□ -1.47
TDA11P38854 ERI1YPL096C-A 207 nt5.85□□□□□ -1.47
TDA11P38854 PTC4YBR125C 1182 nt5.85□□□□□ -1.47
TDA11P38854 ZWF1YNL241C 1518 nt5.84□□□□□ -1.47
TDA11P38854 KDX1YKL161C 1302 nt5.84□□□□□ -1.47
TDA11P38854 BCY1YIL033C 1251 nt5.84□□□□□ -1.47
TDA11P38854 YMR295CYMR295C 594 nt5.84□□□□□ -1.47
TDA11P38854 YNL097W-AYNL097W-A 156 nt5.84□□□□□ -1.47
TDA11P38854 MNN2YBR015C 1794 nt5.84□□□□□ -1.47
TDA11P38854 CCT8YJL008C 1707 nt5.84□□□□□ -1.47
TDA11P38854 POX1YGL205W 2247 nt5.83□□□□□ -1.48
TDA11P38854 BUG1YDL099W 1026 nt5.83□□□□□ -1.48
TDA11P38854 GEP5YLR091W 882 nt5.83□□□□□ -1.48
TDA11P38854 MSO1YNR049C 633 nt5.83□□□□□ -1.48
TDA11P38854 MPA43YNL249C 1629 nt5.83□□□□□ -1.48
TDA11P38854 MAL11YGR289C 1851 nt5.83□□□□□ -1.48
TDA11P38854 YME1YPR024W 2244 nt5.82□□□□□ -1.48
TDA11P38854 CLP1YOR250C 1338 nt5.82□□□□□ -1.48
TDA11P38854 YDL057WYDL057W 987 nt5.82□□□□□ -1.48
TDA11P38854 IDP1YDL066W 1287 nt5.82□□□□□ -1.48
TDA11P38854 YER148W-AYER148W-A 579 nt5.82□□□□□ -1.48
TDA11P38854 SIP2YGL208W 1248 nt5.82□□□□□ -1.48
TDA11P38854 tR(ACG)DtR(ACG)D 73 nt5.82□□□□□ -1.48
TDA11P38854 tR(ACG)EtR(ACG)E 73 nt5.82□□□□□ -1.48
TDA11P38854 tR(ACG)KtR(ACG)K 73 nt5.82□□□□□ -1.48
TDA11P38854 tR(ACG)LtR(ACG)L 73 nt5.82□□□□□ -1.48
TDA11P38854 tR(ACG)OtR(ACG)O 73 nt5.82□□□□□ -1.48
TDA11P38854 YJU3YKL094W 942 nt5.82□□□□□ -1.48
TDA11P38854 YLR157W-EYLR157W-E 165 nt5.82□□□□□ -1.48
TDA11P38854 WHI2YOR043W 1461 nt5.82□□□□□ -1.48
TDA11P38854 ILV1YER086W 1731 nt5.82□□□□□ -1.48
TDA11P38854 SMF2YHR050W 1650 nt5.82□□□□□ -1.48
TDA11P38854 ERC1YHR032W 1746 nt5.81□□□□□ -1.48
TDA11P38854 RNR3YIL066C 2610 nt5.81□□□□□ -1.48
TDA11P38854 PKC1YBL105C 3456 nt5.81□□□□□ -1.48
TDA11P38854 HST3YOR025W 1344 nt5.8□□□□□ -1.48
TDA11P38854 QDR3YBR043C 2070 nt5.8□□□□□ -1.48
TDA11P38854 SNZ3YFL059W 897 nt5.8□□□□□ -1.48
TDA11P38854 ZRT2YLR130C 1269 nt5.8□□□□□ -1.48
TDA11P38854 SNZ2YNL333W 897 nt5.8□□□□□ -1.48
TDA11P38854 BUD9YGR041W 1644 nt5.8□□□□□ -1.48
TDA11P38854 SPS22YCL048W 1392 nt5.8□□□□□ -1.48
TDA11P38854 HXT15YDL245C 1704 nt5.79□□□□□ -1.48
TDA11P38854 HXT16YJR158W 1704 nt5.79□□□□□ -1.48
TDA11P38854 ABZ1YNR033W 2364 nt5.79□□□□□ -1.48
TDA11P38854 RIX7YLL034C 2514 nt5.79□□□□□ -1.48
TDA11P38854 RME1YGR044C 903 nt5.79□□□□□ -1.48
TDA11P38854 RPS3YNL178W 723 nt5.79□□□□□ -1.48
TDA11P38854 RPN7YPR108W 1290 nt5.79□□□□□ -1.48
TDA11P38854 CDC16YKL022C 2523 nt5.79□□□□□ -1.48
TDA11P38854 ISN1YOR155C 1353 nt5.79□□□□□ -1.48
TDA11P38854 MKK1YOR231W 1527 nt5.79□□□□□ -1.48
TDA11P38854 PDC1YLR044C 1692 nt5.79□□□□□ -1.48
TDA11P38854 GEX1YCL073C 1848 nt5.78□□□□□ -1.48
TDA11P38854 GEX2YKR106W 1848 nt5.78□□□□□ -1.48
TDA11P38854 VTH1YIL173W 4650 nt5.78□□□□□ -1.48
TDA11P38854 VTH2YJL222W 4650 nt5.78□□□□□ -1.48
TDA11P38854 SSK1YLR006C 2139 nt5.78□□□□□ -1.48
TDA11P38854 YDR053WYDR053W 396 nt5.78□□□□□ -1.48
TDA11P38854 YHL018WYHL018W 363 nt5.78□□□□□ -1.48
TDA11P38854 MPC2YHR162W 390 nt5.78□□□□□ -1.48
TDA11P38854 YPR196WYPR196W 1413 nt5.78□□□□□ -1.48
TDA11P38854 LYS21YDL131W 1323 nt5.77□□□□□ -1.49
TDA11P38854 ASF2YDL197C 1578 nt5.77□□□□□ -1.49
TDA11P38854 HAP2YGL237C 798 nt5.77□□□□□ -1.49
TDA11P38854 FAF1YIL019W 1041 nt5.77□□□□□ -1.49
TDA11P38854 PRE3YJL001W 648 nt5.77□□□□□ -1.49
TDA11P38854 YLR317WYLR317W 435 nt5.77□□□□□ -1.49
TDA11P38854 RHO2YNL090W 579 nt5.77□□□□□ -1.49
TDA11P38854 HIS7YBR248C 1659 nt5.77□□□□□ -1.49
TDA11P38854 ALT1YLR089C 1779 nt5.77□□□□□ -1.49
TDA11P38854 UBX2YML013W 1755 nt5.77□□□□□ -1.49
TDA11P38854 YPK2YMR104C 2034 nt5.77□□□□□ -1.49
TDA11P38854 HSF1YGL073W 2502 nt5.77□□□□□ -1.49
TDA11P38854 SNU71YGR013W 1863 nt5.77□□□□□ -1.49
TDA11P38854 OXP1YKL215C 3861 nt5.76□□□□□ -1.49
TDA11P38854 TEL2YGR099W 2067 nt5.76□□□□□ -1.49
TDA11P38854 DSF1YEL070W 1509 nt5.76□□□□□ -1.49
TDA11P38854 YNR073CYNR073C 1509 nt5.76□□□□□ -1.49
TDA11P38854 VPS24YKL041W 675 nt5.76□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 23.3 ms