Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Sox5P35710 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.64■■□□□ 1.37
Sox5P35710 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Sox5P35710 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.64■■□□□ 1.37
Sox5P35710 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Sox5P35710 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sox5P35710 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Sox5P35710 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Sox5P35710 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Sox5P35710 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Sox5P35710 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Sox5P35710 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Sox5P35710 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sox5P35710 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sox5P35710 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.6■■□□□ 1.37
Sox5P35710 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.6■■□□□ 1.37
Sox5P35710 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Sox5P35710 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Sox5P35710 Gm12504-201ENSMUST00000120860 2231 ntBASIC23.59■■□□□ 1.37
Sox5P35710 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Sox5P35710 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sox5P35710 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sox5P35710 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sox5P35710 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
Sox5P35710 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
Sox5P35710 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sox5P35710 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.57■■□□□ 1.36
Sox5P35710 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sox5P35710 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.57■■□□□ 1.36
Sox5P35710 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.57■■□□□ 1.36
Sox5P35710 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sox5P35710 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Sox5P35710 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sox5P35710 Gm44428-201ENSMUST00000204474 874 ntBASIC23.56■■□□□ 1.36
Sox5P35710 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Sox5P35710 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sox5P35710 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sox5P35710 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sox5P35710 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sox5P35710 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sox5P35710 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sox5P35710 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sox5P35710 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sox5P35710 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Sox5P35710 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Sox5P35710 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Sox5P35710 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sox5P35710 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sox5P35710 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
Sox5P35710 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sox5P35710 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Sox5P35710 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Sox5P35710 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sox5P35710 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.53■■□□□ 1.36
Sox5P35710 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.53■■□□□ 1.36
Sox5P35710 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.53■■□□□ 1.36
Sox5P35710 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.53■■□□□ 1.36
Sox5P35710 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sox5P35710 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Sox5P35710 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Sox5P35710 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sox5P35710 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Sox5P35710 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Sox5P35710 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Sox5P35710 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Sox5P35710 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sox5P35710 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sox5P35710 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sox5P35710 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Sox5P35710 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Sox5P35710 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sox5P35710 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sox5P35710 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.51■■□□□ 1.35
Sox5P35710 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.5■■□□□ 1.35
Sox5P35710 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sox5P35710 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sox5P35710 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sox5P35710 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.5■■□□□ 1.35
Sox5P35710 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Sox5P35710 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Sox5P35710 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Sox5P35710 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sox5P35710 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sox5P35710 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sox5P35710 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sox5P35710 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sox5P35710 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sox5P35710 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sox5P35710 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sox5P35710 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sox5P35710 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sox5P35710 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sox5P35710 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sox5P35710 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sox5P35710 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Sox5P35710 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sox5P35710 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Sox5P35710 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.47■■□□□ 1.35
Sox5P35710 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sox5P35710 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms