Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col8a2P25318 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col8a2P25318 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Col8a2P25318 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.15■□□□□ 0.5
Col8a2P25318 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
Col8a2P25318 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col8a2P25318 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Col8a2P25318 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col8a2P25318 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col8a2P25318 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col8a2P25318 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.14■□□□□ 0.49
Col8a2P25318 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col8a2P25318 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col8a2P25318 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col8a2P25318 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col8a2P25318 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col8a2P25318 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col8a2P25318 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.13■□□□□ 0.49
Col8a2P25318 Gm15820-201ENSMUST00000201566 728 ntBASIC18.13■□□□□ 0.49
Col8a2P25318 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.13■□□□□ 0.49
Col8a2P25318 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col8a2P25318 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Col8a2P25318 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col8a2P25318 Gm15546-201ENSMUST00000122095 826 ntBASIC18.12■□□□□ 0.49
Col8a2P25318 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col8a2P25318 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col8a2P25318 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.11■□□□□ 0.49
Col8a2P25318 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.11■□□□□ 0.49
Col8a2P25318 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col8a2P25318 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col8a2P25318 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col8a2P25318 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col8a2P25318 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col8a2P25318 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col8a2P25318 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col8a2P25318 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col8a2P25318 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Col8a2P25318 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.1■□□□□ 0.49
Col8a2P25318 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col8a2P25318 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col8a2P25318 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.1■□□□□ 0.49
Col8a2P25318 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col8a2P25318 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col8a2P25318 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col8a2P25318 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Col8a2P25318 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col8a2P25318 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Col8a2P25318 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col8a2P25318 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col8a2P25318 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col8a2P25318 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col8a2P25318 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.08■□□□□ 0.49
Col8a2P25318 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col8a2P25318 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col8a2P25318 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.08■□□□□ 0.48
Col8a2P25318 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col8a2P25318 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col8a2P25318 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Col8a2P25318 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.07■□□□□ 0.48
Col8a2P25318 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col8a2P25318 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col8a2P25318 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col8a2P25318 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col8a2P25318 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col8a2P25318 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col8a2P25318 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col8a2P25318 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col8a2P25318 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col8a2P25318 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col8a2P25318 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Col8a2P25318 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Col8a2P25318 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col8a2P25318 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col8a2P25318 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col8a2P25318 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col8a2P25318 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col8a2P25318 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col8a2P25318 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col8a2P25318 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col8a2P25318 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col8a2P25318 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Col8a2P25318 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col8a2P25318 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col8a2P25318 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col8a2P25318 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col8a2P25318 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col8a2P25318 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col8a2P25318 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col8a2P25318 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col8a2P25318 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.03■□□□□ 0.48
Col8a2P25318 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col8a2P25318 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.03■□□□□ 0.48
Col8a2P25318 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col8a2P25318 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col8a2P25318 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Col8a2P25318 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Col8a2P25318 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col8a2P25318 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col8a2P25318 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.02■□□□□ 0.48
Col8a2P25318 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms