Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Fv4P11370 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Fv4P11370 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
Fv4P11370 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Fv4P11370 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.93■□□□□ 0.94
Fv4P11370 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.93■□□□□ 0.94
Fv4P11370 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fv4P11370 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fv4P11370 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.93■□□□□ 0.94
Fv4P11370 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Fv4P11370 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fv4P11370 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fv4P11370 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fv4P11370 Gm11687-201ENSMUST00000118911 886 ntBASIC20.92■□□□□ 0.94
Fv4P11370 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.92■□□□□ 0.94
Fv4P11370 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fv4P11370 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fv4P11370 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Fv4P11370 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fv4P11370 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Fv4P11370 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fv4P11370 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.91■□□□□ 0.94
Fv4P11370 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Fv4P11370 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.91■□□□□ 0.94
Fv4P11370 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.9■□□□□ 0.94
Fv4P11370 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.9■□□□□ 0.94
Fv4P11370 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fv4P11370 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Fv4P11370 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Fv4P11370 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.9■□□□□ 0.94
Fv4P11370 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fv4P11370 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Fv4P11370 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.89■□□□□ 0.94
Fv4P11370 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fv4P11370 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fv4P11370 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Fv4P11370 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Fv4P11370 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fv4P11370 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fv4P11370 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fv4P11370 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fv4P11370 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fv4P11370 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fv4P11370 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.88■□□□□ 0.93
Fv4P11370 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fv4P11370 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fv4P11370 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Fv4P11370 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Fv4P11370 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fv4P11370 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.88■□□□□ 0.93
Fv4P11370 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fv4P11370 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Fv4P11370 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Fv4P11370 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fv4P11370 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Fv4P11370 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fv4P11370 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fv4P11370 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Fv4P11370 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fv4P11370 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Fv4P11370 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.85■□□□□ 0.93
Fv4P11370 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Fv4P11370 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fv4P11370 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Fv4P11370 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Fv4P11370 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Fv4P11370 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Fv4P11370 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fv4P11370 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Fv4P11370 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fv4P11370 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fv4P11370 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Fv4P11370 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Fv4P11370 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Fv4P11370 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.83■□□□□ 0.93
Fv4P11370 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.83■□□□□ 0.93
Fv4P11370 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Fv4P11370 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.82■□□□□ 0.92
Fv4P11370 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Fv4P11370 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Fv4P11370 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fv4P11370 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fv4P11370 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Fv4P11370 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fv4P11370 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fv4P11370 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fv4P11370 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Fv4P11370 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Fv4P11370 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fv4P11370 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Fv4P11370 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fv4P11370 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
Fv4P11370 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fv4P11370 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Fv4P11370 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Fv4P11370 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.79■□□□□ 0.92
Fv4P11370 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fv4P11370 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Fv4P11370 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fv4P11370 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms