Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.65■□□□□ 0.58
Gfra3O35118 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.65■□□□□ 0.58
Gfra3O35118 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gfra3O35118 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.65■□□□□ 0.58
Gfra3O35118 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gfra3O35118 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gfra3O35118 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Gfra3O35118 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gfra3O35118 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gfra3O35118 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gfra3O35118 Gm15820-201ENSMUST00000201566 728 ntBASIC18.64■□□□□ 0.57
Gfra3O35118 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gfra3O35118 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gfra3O35118 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.64■□□□□ 0.57
Gfra3O35118 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gfra3O35118 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gfra3O35118 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gfra3O35118 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Gfra3O35118 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gfra3O35118 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gfra3O35118 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.63■□□□□ 0.57
Gfra3O35118 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gfra3O35118 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gfra3O35118 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gfra3O35118 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gfra3O35118 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gfra3O35118 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gfra3O35118 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Gfra3O35118 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gfra3O35118 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Gfra3O35118 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gfra3O35118 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gfra3O35118 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gfra3O35118 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gfra3O35118 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gfra3O35118 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Gfra3O35118 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gfra3O35118 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gfra3O35118 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Gfra3O35118 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Gfra3O35118 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gfra3O35118 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gfra3O35118 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gfra3O35118 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gfra3O35118 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gfra3O35118 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gfra3O35118 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gfra3O35118 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gfra3O35118 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gfra3O35118 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gfra3O35118 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gfra3O35118 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gfra3O35118 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gfra3O35118 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gfra3O35118 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gfra3O35118 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gfra3O35118 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.59■□□□□ 0.57
Gfra3O35118 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gfra3O35118 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gfra3O35118 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Gfra3O35118 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Gfra3O35118 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gfra3O35118 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Gfra3O35118 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Gfra3O35118 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gfra3O35118 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gfra3O35118 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gfra3O35118 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.57■□□□□ 0.56
Gfra3O35118 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gfra3O35118 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.57■□□□□ 0.56
Gfra3O35118 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.56■□□□□ 0.56
Gfra3O35118 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gfra3O35118 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.56■□□□□ 0.56
Gfra3O35118 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gfra3O35118 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.56■□□□□ 0.56
Gfra3O35118 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gfra3O35118 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gfra3O35118 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Gfra3O35118 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Gfra3O35118 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gfra3O35118 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gfra3O35118 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.55■□□□□ 0.56
Gfra3O35118 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gfra3O35118 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gfra3O35118 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gfra3O35118 Gm22567-201ENSMUST00000175542 342 ntBASIC18.54■□□□□ 0.56
Gfra3O35118 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gfra3O35118 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Gfra3O35118 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gfra3O35118 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Gfra3O35118 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gfra3O35118 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gfra3O35118 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gfra3O35118 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.53■□□□□ 0.56
Gfra3O35118 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.53■□□□□ 0.56
Gfra3O35118 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gfra3O35118 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gfra3O35118 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gfra3O35118 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gfra3O35118 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms