Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.97■■□□□ 1.11
Trove2O08848 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trove2O08848 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trove2O08848 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trove2O08848 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trove2O08848 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trove2O08848 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
Trove2O08848 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trove2O08848 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Trove2O08848 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trove2O08848 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Trove2O08848 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trove2O08848 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trove2O08848 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.95■■□□□ 1.1
Trove2O08848 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trove2O08848 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trove2O08848 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trove2O08848 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trove2O08848 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trove2O08848 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Trove2O08848 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trove2O08848 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trove2O08848 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trove2O08848 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Trove2O08848 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trove2O08848 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.92■■□□□ 1.1
Trove2O08848 Gm9812-201ENSMUST00000061934 968 ntBASIC21.92■■□□□ 1.1
Trove2O08848 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Trove2O08848 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trove2O08848 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trove2O08848 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Trove2O08848 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Trove2O08848 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trove2O08848 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.91■■□□□ 1.1
Trove2O08848 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trove2O08848 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trove2O08848 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trove2O08848 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Trove2O08848 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trove2O08848 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trove2O08848 Gm45364-201ENSMUST00000210883 159 ntBASIC21.9■■□□□ 1.1
Trove2O08848 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Trove2O08848 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Trove2O08848 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trove2O08848 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trove2O08848 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trove2O08848 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trove2O08848 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.89■■□□□ 1.09
Trove2O08848 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trove2O08848 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trove2O08848 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.88■■□□□ 1.09
Trove2O08848 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trove2O08848 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trove2O08848 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trove2O08848 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trove2O08848 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trove2O08848 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.87■■□□□ 1.09
Trove2O08848 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trove2O08848 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.87■■□□□ 1.09
Trove2O08848 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.86■■□□□ 1.09
Trove2O08848 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Trove2O08848 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trove2O08848 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trove2O08848 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.86■■□□□ 1.09
Trove2O08848 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Trove2O08848 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trove2O08848 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.85■■□□□ 1.09
Trove2O08848 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trove2O08848 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.85■■□□□ 1.09
Trove2O08848 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trove2O08848 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trove2O08848 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trove2O08848 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trove2O08848 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trove2O08848 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trove2O08848 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.84■■□□□ 1.09
Trove2O08848 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trove2O08848 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.84■■□□□ 1.09
Trove2O08848 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trove2O08848 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trove2O08848 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.83■■□□□ 1.09
Trove2O08848 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.83■■□□□ 1.09
Trove2O08848 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trove2O08848 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trove2O08848 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trove2O08848 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.83■■□□□ 1.09
Trove2O08848 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.83■■□□□ 1.08
Trove2O08848 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trove2O08848 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Trove2O08848 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trove2O08848 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trove2O08848 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.82■■□□□ 1.08
Trove2O08848 Gm6311-201ENSMUST00000073790 878 ntBASIC21.82■■□□□ 1.08
Trove2O08848 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trove2O08848 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trove2O08848 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.81■■□□□ 1.08
Trove2O08848 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trove2O08848 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trove2O08848 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.81■■□□□ 1.08
Trove2O08848 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms