Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.1■□□□□ 0.49
Mmp27D3YV89 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp27D3YV89 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.09■□□□□ 0.49
Mmp27D3YV89 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp27D3YV89 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.09■□□□□ 0.49
Mmp27D3YV89 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Mmp27D3YV89 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Mmp27D3YV89 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.09■□□□□ 0.49
Mmp27D3YV89 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp27D3YV89 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mmp27D3YV89 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Mmp27D3YV89 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mmp27D3YV89 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.08■□□□□ 0.49
Mmp27D3YV89 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mmp27D3YV89 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp27D3YV89 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.08■□□□□ 0.48
Mmp27D3YV89 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp27D3YV89 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp27D3YV89 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp27D3YV89 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Mmp27D3YV89 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp27D3YV89 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Mmp27D3YV89 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.06■□□□□ 0.48
Mmp27D3YV89 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.06■□□□□ 0.48
Mmp27D3YV89 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp27D3YV89 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp27D3YV89 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp27D3YV89 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Mmp27D3YV89 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp27D3YV89 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp27D3YV89 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Mmp27D3YV89 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp27D3YV89 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp27D3YV89 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Mmp27D3YV89 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.05■□□□□ 0.48
Mmp27D3YV89 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.05■□□□□ 0.48
Mmp27D3YV89 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.05■□□□□ 0.48
Mmp27D3YV89 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp27D3YV89 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp27D3YV89 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp27D3YV89 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp27D3YV89 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp27D3YV89 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp27D3YV89 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp27D3YV89 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Mmp27D3YV89 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp27D3YV89 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp27D3YV89 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp27D3YV89 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp27D3YV89 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp27D3YV89 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp27D3YV89 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp27D3YV89 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp27D3YV89 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp27D3YV89 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp27D3YV89 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp27D3YV89 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp27D3YV89 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp27D3YV89 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp27D3YV89 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp27D3YV89 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp27D3YV89 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp27D3YV89 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp27D3YV89 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Mmp27D3YV89 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp27D3YV89 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Mmp27D3YV89 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp27D3YV89 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Mmp27D3YV89 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.01■□□□□ 0.47
Mmp27D3YV89 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp27D3YV89 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp27D3YV89 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp27D3YV89 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mmp27D3YV89 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Mmp27D3YV89 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18■□□□□ 0.47
Mmp27D3YV89 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp27D3YV89 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp27D3YV89 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp27D3YV89 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Mmp27D3YV89 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mmp27D3YV89 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp27D3YV89 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp27D3YV89 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Mmp27D3YV89 Gm45364-201ENSMUST00000210883 159 ntBASIC17.99■□□□□ 0.47
Mmp27D3YV89 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp27D3YV89 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp27D3YV89 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp27D3YV89 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp27D3YV89 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Mmp27D3YV89 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp27D3YV89 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.98■□□□□ 0.47
Mmp27D3YV89 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp27D3YV89 Scarna2-201ENSMUST00000157560 414 ntBASIC17.98■□□□□ 0.47
Mmp27D3YV89 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp27D3YV89 Mir6538-201ENSMUST00000183713 110 ntBASIC17.98■□□□□ 0.47
Mmp27D3YV89 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
Mmp27D3YV89 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp27D3YV89 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp27D3YV89 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp27D3YV89 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms