Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ubr4A2AN08 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ubr4A2AN08 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC11.95□□□□□ -0.5
Ubr4A2AN08 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ubr4A2AN08 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubr4A2AN08 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ubr4A2AN08 Gm43445-201ENSMUST00000198564 2091 ntBASIC11.95□□□□□ -0.5
Ubr4A2AN08 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubr4A2AN08 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubr4A2AN08 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubr4A2AN08 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubr4A2AN08 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubr4A2AN08 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubr4A2AN08 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubr4A2AN08 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ubr4A2AN08 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ubr4A2AN08 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ubr4A2AN08 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ubr4A2AN08 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ubr4A2AN08 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubr4A2AN08 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubr4A2AN08 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubr4A2AN08 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ubr4A2AN08 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubr4A2AN08 AC117769.4-201ENSMUST00000225679 685 ntBASIC11.93□□□□□ -0.5
Ubr4A2AN08 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ubr4A2AN08 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ubr4A2AN08 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ubr4A2AN08 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC11.93□□□□□ -0.5
Ubr4A2AN08 Gm6658-202ENSMUST00000209493 1885 ntBASIC11.93□□□□□ -0.5
Ubr4A2AN08 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ubr4A2AN08 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC11.92□□□□□ -0.5
Ubr4A2AN08 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr4A2AN08 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Ubr4A2AN08 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr4A2AN08 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ubr4A2AN08 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC11.91□□□□□ -0.5
Ubr4A2AN08 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr4A2AN08 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr4A2AN08 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr4A2AN08 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC11.91□□□□□ -0.5
Ubr4A2AN08 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Nespas-201ENSMUST00000143738 1083 ntBASIC11.9□□□□□ -0.5
Ubr4A2AN08 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC11.9□□□□□ -0.5
Ubr4A2AN08 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.9□□□□□ -0.5
Ubr4A2AN08 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr4A2AN08 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr4A2AN08 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr4A2AN08 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ubr4A2AN08 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC11.89□□□□□ -0.51
Ubr4A2AN08 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Ubr4A2AN08 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubr4A2AN08 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubr4A2AN08 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ubr4A2AN08 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubr4A2AN08 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ubr4A2AN08 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ubr4A2AN08 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ubr4A2AN08 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.88□□□□□ -0.51
Ubr4A2AN08 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubr4A2AN08 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC11.87□□□□□ -0.51
Ubr4A2AN08 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubr4A2AN08 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubr4A2AN08 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubr4A2AN08 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubr4A2AN08 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ubr4A2AN08 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC11.87□□□□□ -0.51
Ubr4A2AN08 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC11.86□□□□□ -0.51
Ubr4A2AN08 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ubr4A2AN08 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC11.86□□□□□ -0.51
Ubr4A2AN08 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ubr4A2AN08 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.85□□□□□ -0.51
Ubr4A2AN08 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubr4A2AN08 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.85□□□□□ -0.51
Ubr4A2AN08 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubr4A2AN08 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubr4A2AN08 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubr4A2AN08 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ubr4A2AN08 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubr4A2AN08 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC11.84□□□□□ -0.51
Ubr4A2AN08 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ubr4A2AN08 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC11.83□□□□□ -0.51
Ubr4A2AN08 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubr4A2AN08 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC11.83□□□□□ -0.52
Ubr4A2AN08 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubr4A2AN08 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC11.83□□□□□ -0.52
Ubr4A2AN08 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 209.8 ms