Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12d-1A0N8R0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12d-1A0N8R0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.4■□□□□ 0.38
Trav12d-1A0N8R0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12d-1A0N8R0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12d-1A0N8R0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12d-1A0N8R0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12d-1A0N8R0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12d-1A0N8R0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trav12d-1A0N8R0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.39■□□□□ 0.38
Trav12d-1A0N8R0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav12d-1A0N8R0 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.39■□□□□ 0.37
Trav12d-1A0N8R0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12d-1A0N8R0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav12d-1A0N8R0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trav12d-1A0N8R0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12d-1A0N8R0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav12d-1A0N8R0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Trav12d-1A0N8R0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.38■□□□□ 0.37
Trav12d-1A0N8R0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trav12d-1A0N8R0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12d-1A0N8R0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trav12d-1A0N8R0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.37■□□□□ 0.37
Trav12d-1A0N8R0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12d-1A0N8R0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12d-1A0N8R0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12d-1A0N8R0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav12d-1A0N8R0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12d-1A0N8R0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12d-1A0N8R0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav12d-1A0N8R0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12d-1A0N8R0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12d-1A0N8R0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.36■□□□□ 0.37
Trav12d-1A0N8R0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Trav12d-1A0N8R0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav12d-1A0N8R0 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.35■□□□□ 0.37
Trav12d-1A0N8R0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12d-1A0N8R0 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.34■□□□□ 0.37
Trav12d-1A0N8R0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trav12d-1A0N8R0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12d-1A0N8R0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12d-1A0N8R0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12d-1A0N8R0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav12d-1A0N8R0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.33■□□□□ 0.37
Trav12d-1A0N8R0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav12d-1A0N8R0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.33■□□□□ 0.36
Trav12d-1A0N8R0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav12d-1A0N8R0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav12d-1A0N8R0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trav12d-1A0N8R0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav12d-1A0N8R0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trav12d-1A0N8R0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav12d-1A0N8R0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trav12d-1A0N8R0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12d-1A0N8R0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12d-1A0N8R0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trav12d-1A0N8R0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12d-1A0N8R0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav12d-1A0N8R0 Gm7432-201ENSMUST00000210343 879 ntBASIC17.32■□□□□ 0.36
Trav12d-1A0N8R0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trav12d-1A0N8R0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav12d-1A0N8R0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav12d-1A0N8R0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12d-1A0N8R0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12d-1A0N8R0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12d-1A0N8R0 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.3■□□□□ 0.36
Trav12d-1A0N8R0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav12d-1A0N8R0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Trav12d-1A0N8R0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12d-1A0N8R0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trav12d-1A0N8R0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Trav12d-1A0N8R0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12d-1A0N8R0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav12d-1A0N8R0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12d-1A0N8R0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12d-1A0N8R0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12d-1A0N8R0 Gm11599-201ENSMUST00000118720 878 ntBASIC17.28■□□□□ 0.36
Trav12d-1A0N8R0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12d-1A0N8R0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trav12d-1A0N8R0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav12d-1A0N8R0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav12d-1A0N8R0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.27■□□□□ 0.36
Trav12d-1A0N8R0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav12d-1A0N8R0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms