Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Gm27325-201ENSMUST00000175467 74 ntBASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Shroom3-211ENSMUST00000225438 5742 ntBASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3880A0A1B0GSB3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3880A0A1B0GSB3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3880A0A1B0GSB3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Gm3880A0A1B0GSB3 Gm30346-201ENSMUST00000218641 1699 ntBASIC10.83□□□□□ -0.68
Gm3880A0A1B0GSB3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3880A0A1B0GSB3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Gm3880A0A1B0GSB3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Gm3880A0A1B0GSB3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm3880A0A1B0GSB3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm3880A0A1B0GSB3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm3880A0A1B0GSB3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm3880A0A1B0GSB3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3880A0A1B0GSB3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3880A0A1B0GSB3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3880A0A1B0GSB3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3880A0A1B0GSB3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Gm3880A0A1B0GSB3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3880A0A1B0GSB3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3880A0A1B0GSB3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3880A0A1B0GSB3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3880A0A1B0GSB3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Gm3880A0A1B0GSB3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Gm3880A0A1B0GSB3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3880A0A1B0GSB3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm3880A0A1B0GSB3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Gm3880A0A1B0GSB3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm3880A0A1B0GSB3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm3880A0A1B0GSB3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Gm3880A0A1B0GSB3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm3880A0A1B0GSB3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm3880A0A1B0GSB3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm3880A0A1B0GSB3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm3880A0A1B0GSB3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm3880A0A1B0GSB3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm3880A0A1B0GSB3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm3880A0A1B0GSB3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm3880A0A1B0GSB3 Gm43006-201ENSMUST00000197702 1602 ntBASIC10.8□□□□□ -0.68
Gm3880A0A1B0GSB3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Gm3880A0A1B0GSB3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm3880A0A1B0GSB3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm3880A0A1B0GSB3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Gm3880A0A1B0GSB3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm3880A0A1B0GSB3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm3880A0A1B0GSB3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm3880A0A1B0GSB3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm3880A0A1B0GSB3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm3880A0A1B0GSB3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm3880A0A1B0GSB3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm3880A0A1B0GSB3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm3880A0A1B0GSB3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Gm3880A0A1B0GSB3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm3880A0A1B0GSB3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm3880A0A1B0GSB3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm3880A0A1B0GSB3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Gm3880A0A1B0GSB3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Gm3880A0A1B0GSB3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm3880A0A1B0GSB3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm3880A0A1B0GSB3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm3880A0A1B0GSB3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm3880A0A1B0GSB3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
Gm3880A0A1B0GSB3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC10.79□□□□□ -0.68
Gm3880A0A1B0GSB3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm3880A0A1B0GSB3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm3880A0A1B0GSB3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm3880A0A1B0GSB3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Gm3880A0A1B0GSB3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Gm3880A0A1B0GSB3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm3880A0A1B0GSB3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm3880A0A1B0GSB3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Gm3880A0A1B0GSB3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm3880A0A1B0GSB3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Gm3880A0A1B0GSB3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm3880A0A1B0GSB3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Gm3880A0A1B0GSB3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm3880A0A1B0GSB3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm3880A0A1B0GSB3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
Gm3880A0A1B0GSB3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm3880A0A1B0GSB3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Gm3880A0A1B0GSB3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Gm3880A0A1B0GSB3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm3880A0A1B0GSB3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Gm3880A0A1B0GSB3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Gm3880A0A1B0GSB3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms