Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-52A0A0A6YXC3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.42■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ighv1-52A0A0A6YXC3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.39■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-52A0A0A6YXC3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Gm5921-201ENSMUST00000075898 882 ntBASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-52A0A0A6YXC3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.36■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-52A0A0A6YXC3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.35■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.35■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-52A0A0A6YXC3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-52A0A0A6YXC3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Ighv1-52A0A0A6YXC3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.33■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-52A0A0A6YXC3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms