Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.22■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.22■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.21■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Gm6311-201ENSMUST00000073790 878 ntBASIC15.21■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-11A0A0A6YWI9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.2■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.2■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-11A0A0A6YWI9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.2■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.2■□□□□ 0.02
Ighv1-11A0A0A6YWI9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-11A0A0A6YWI9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.19■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-11A0A0A6YWI9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-11A0A0A6YWI9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.19■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-11A0A0A6YWI9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-11A0A0A6YWI9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.18■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.17■□□□□ 0.02
Ighv1-11A0A0A6YWI9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.16■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-11A0A0A6YWI9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.15■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-11A0A0A6YWI9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ighv1-11A0A0A6YWI9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-11A0A0A6YWI9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms