Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav16A0A075B653 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav16A0A075B653 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav16A0A075B653 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav16A0A075B653 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav16A0A075B653 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.59■□□□□ 0.25
Trav16A0A075B653 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Trav16A0A075B653 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav16A0A075B653 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav16A0A075B653 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16A0A075B653 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16A0A075B653 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16A0A075B653 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16A0A075B653 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav16A0A075B653 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16A0A075B653 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16A0A075B653 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav16A0A075B653 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav16A0A075B653 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav16A0A075B653 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav16A0A075B653 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav16A0A075B653 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.57■□□□□ 0.24
Trav16A0A075B653 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trav16A0A075B653 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.56■□□□□ 0.24
Trav16A0A075B653 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav16A0A075B653 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav16A0A075B653 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav16A0A075B653 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16A0A075B653 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16A0A075B653 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav16A0A075B653 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16A0A075B653 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16A0A075B653 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16A0A075B653 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav16A0A075B653 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16A0A075B653 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16A0A075B653 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav16A0A075B653 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16A0A075B653 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav16A0A075B653 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16A0A075B653 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16A0A075B653 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav16A0A075B653 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.54■□□□□ 0.24
Trav16A0A075B653 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16A0A075B653 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16A0A075B653 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16A0A075B653 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16A0A075B653 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav16A0A075B653 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav16A0A075B653 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav16A0A075B653 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav16A0A075B653 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Trav16A0A075B653 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav16A0A075B653 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav16A0A075B653 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav16A0A075B653 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav16A0A075B653 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.53■□□□□ 0.24
Trav16A0A075B653 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav16A0A075B653 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav16A0A075B653 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav16A0A075B653 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav16A0A075B653 Gm22567-201ENSMUST00000175542 342 ntBASIC16.52■□□□□ 0.24
Trav16A0A075B653 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav16A0A075B653 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav16A0A075B653 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav16A0A075B653 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav16A0A075B653 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trav16A0A075B653 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav16A0A075B653 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav16A0A075B653 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav16A0A075B653 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav16A0A075B653 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav16A0A075B653 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav16A0A075B653 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav16A0A075B653 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav16A0A075B653 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav16A0A075B653 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav16A0A075B653 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.5■□□□□ 0.23
Trav16A0A075B653 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav16A0A075B653 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav16A0A075B653 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav16A0A075B653 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav16A0A075B653 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.5■□□□□ 0.23
Trav16A0A075B653 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav16A0A075B653 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.5■□□□□ 0.23
Trav16A0A075B653 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav16A0A075B653 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav16A0A075B653 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav16A0A075B653 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav16A0A075B653 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav16A0A075B653 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav16A0A075B653 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav16A0A075B653 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav16A0A075B653 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav16A0A075B653 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav16A0A075B653 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav16A0A075B653 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav16A0A075B653 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav16A0A075B653 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav16A0A075B653 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms