Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.35■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.35■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav15d-1-dv6d-1A0A075B624 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.31■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.3■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Gm45364-201ENSMUST00000210883 159 ntBASIC18.29■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.29■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav15d-1-dv6d-1A0A075B624 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.26■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.25■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.24■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trav15d-1-dv6d-1A0A075B624 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms