Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Gm15820-201ENSMUST00000201566 728 ntBASIC18.62■□□□□ 0.57
Trav5-1A0A075B5Z7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.62■□□□□ 0.57
Trav5-1A0A075B5Z7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trav5-1A0A075B5Z7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav5-1A0A075B5Z7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav5-1A0A075B5Z7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trav5-1A0A075B5Z7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav5-1A0A075B5Z7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trav5-1A0A075B5Z7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav5-1A0A075B5Z7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav5-1A0A075B5Z7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Trav5-1A0A075B5Z7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav5-1A0A075B5Z7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav5-1A0A075B5Z7 Gm10232-201ENSMUST00000089221 720 ntBASIC18.61■□□□□ 0.57
Trav5-1A0A075B5Z7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav5-1A0A075B5Z7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trav5-1A0A075B5Z7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav5-1A0A075B5Z7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trav5-1A0A075B5Z7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav5-1A0A075B5Z7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Trav5-1A0A075B5Z7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.6■□□□□ 0.57
Trav5-1A0A075B5Z7 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.6■□□□□ 0.57
Trav5-1A0A075B5Z7 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.6■□□□□ 0.57
Trav5-1A0A075B5Z7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav5-1A0A075B5Z7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav5-1A0A075B5Z7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav5-1A0A075B5Z7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav5-1A0A075B5Z7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav5-1A0A075B5Z7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trav5-1A0A075B5Z7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trav5-1A0A075B5Z7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trav5-1A0A075B5Z7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav5-1A0A075B5Z7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav5-1A0A075B5Z7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav5-1A0A075B5Z7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav5-1A0A075B5Z7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.59■□□□□ 0.57
Trav5-1A0A075B5Z7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav5-1A0A075B5Z7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav5-1A0A075B5Z7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav5-1A0A075B5Z7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav5-1A0A075B5Z7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav5-1A0A075B5Z7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav5-1A0A075B5Z7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav5-1A0A075B5Z7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav5-1A0A075B5Z7 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.58■□□□□ 0.56
Trav5-1A0A075B5Z7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav5-1A0A075B5Z7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav5-1A0A075B5Z7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trav5-1A0A075B5Z7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trav5-1A0A075B5Z7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav5-1A0A075B5Z7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav5-1A0A075B5Z7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.57■□□□□ 0.56
Trav5-1A0A075B5Z7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav5-1A0A075B5Z7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav5-1A0A075B5Z7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav5-1A0A075B5Z7 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.57■□□□□ 0.56
Trav5-1A0A075B5Z7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav5-1A0A075B5Z7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav5-1A0A075B5Z7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav5-1A0A075B5Z7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav5-1A0A075B5Z7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav5-1A0A075B5Z7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.56■□□□□ 0.56
Trav5-1A0A075B5Z7 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.56■□□□□ 0.56
Trav5-1A0A075B5Z7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav5-1A0A075B5Z7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav5-1A0A075B5Z7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav5-1A0A075B5Z7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav5-1A0A075B5Z7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav5-1A0A075B5Z7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav5-1A0A075B5Z7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trav5-1A0A075B5Z7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav5-1A0A075B5Z7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav5-1A0A075B5Z7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav5-1A0A075B5Z7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.54■□□□□ 0.56
Trav5-1A0A075B5Z7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav5-1A0A075B5Z7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav5-1A0A075B5Z7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav5-1A0A075B5Z7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Trav5-1A0A075B5Z7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav5-1A0A075B5Z7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav5-1A0A075B5Z7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav5-1A0A075B5Z7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav5-1A0A075B5Z7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav5-1A0A075B5Z7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav5-1A0A075B5Z7 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.53■□□□□ 0.56
Trav5-1A0A075B5Z7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav5-1A0A075B5Z7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Trav5-1A0A075B5Z7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trav5-1A0A075B5Z7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Trav5-1A0A075B5Z7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav5-1A0A075B5Z7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav5-1A0A075B5Z7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.52■□□□□ 0.56
Trav5-1A0A075B5Z7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.52■□□□□ 0.56
Trav5-1A0A075B5Z7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav5-1A0A075B5Z7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Trav5-1A0A075B5Z7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav5-1A0A075B5Z7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav5-1A0A075B5Z7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav5-1A0A075B5Z7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav5-1A0A075B5Z7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms