Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Gm8749-201ENSMUST00000117737 331 ntBASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Gm18666-201ENSMUST00000190039 958 ntBASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gtf2a1Q99PM3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Btrc-209ENSMUST00000224478 2194 ntBASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gtf2a1Q99PM3 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Gtf2a1Q99PM3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gtf2a1Q99PM3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gtf2a1Q99PM3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gtf2a1Q99PM3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Gtf2a1Q99PM3 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gtf2a1Q99PM3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gtf2a1Q99PM3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms