Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Gm12138-201ENSMUST00000122180 951 ntBASIC14.12□□□□□ -0.15
Usp3Q91W36 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp3Q91W36 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Usp3Q91W36 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.12□□□□□ -0.15
Usp3Q91W36 Gm27701-201ENSMUST00000184498 110 ntBASIC14.12□□□□□ -0.15
Usp3Q91W36 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp3Q91W36 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Gm43037-201ENSMUST00000196808 250 ntBASIC14.12□□□□□ -0.15
Usp3Q91W36 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC14.12□□□□□ -0.15
Usp3Q91W36 Gm44953-201ENSMUST00000208745 1286 ntBASIC14.12□□□□□ -0.15
Usp3Q91W36 Gm7653-201ENSMUST00000214567 508 ntBASIC14.12□□□□□ -0.15
Usp3Q91W36 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.12□□□□□ -0.15
Usp3Q91W36 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp3Q91W36 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp3Q91W36 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Usp3Q91W36 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.11□□□□□ -0.15
Usp3Q91W36 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Usp3Q91W36 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Gm12813-201ENSMUST00000119615 902 ntBASIC14.11□□□□□ -0.15
Usp3Q91W36 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.11□□□□□ -0.15
Usp3Q91W36 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp3Q91W36 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp3Q91W36 Gm5745-201ENSMUST00000183748 313 ntBASIC14.11□□□□□ -0.15
Usp3Q91W36 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp3Q91W36 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp3Q91W36 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp3Q91W36 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Gm5161-201ENSMUST00000075243 853 ntBASIC14.11□□□□□ -0.15
Usp3Q91W36 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp3Q91W36 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Usp3Q91W36 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Usp3Q91W36 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.11□□□□□ -0.15
Usp3Q91W36 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.11□□□□□ -0.15
Usp3Q91W36 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp3Q91W36 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.1□□□□□ -0.15
Usp3Q91W36 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usp3Q91W36 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usp3Q91W36 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usp3Q91W36 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.1□□□□□ -0.15
Usp3Q91W36 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp3Q91W36 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp3Q91W36 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.1□□□□□ -0.15
Usp3Q91W36 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.1□□□□□ -0.15
Usp3Q91W36 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms