Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Rpap2Q8VC34 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rpap2Q8VC34 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Rpap2Q8VC34 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpap2Q8VC34 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rpap2Q8VC34 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rpap2Q8VC34 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpap2Q8VC34 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rpap2Q8VC34 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rpap2Q8VC34 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Rpap2Q8VC34 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpap2Q8VC34 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rpap2Q8VC34 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rpap2Q8VC34 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rpap2Q8VC34 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rpap2Q8VC34 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.05■□□□□ -0
Rpap2Q8VC34 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpap2Q8VC34 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpap2Q8VC34 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rpap2Q8VC34 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.05■□□□□ -0
Rpap2Q8VC34 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rpap2Q8VC34 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpap2Q8VC34 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpap2Q8VC34 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rpap2Q8VC34 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.05■□□□□ -0
Rpap2Q8VC34 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rpap2Q8VC34 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rpap2Q8VC34 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.04■□□□□ -0
Rpap2Q8VC34 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rpap2Q8VC34 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.04■□□□□ -0
Rpap2Q8VC34 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rpap2Q8VC34 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rpap2Q8VC34 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Gm15770-201ENSMUST00000117498 584 ntBASIC15.04■□□□□ -0
Rpap2Q8VC34 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.04■□□□□ -0
Rpap2Q8VC34 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rpap2Q8VC34 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.04■□□□□ -0
Rpap2Q8VC34 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rpap2Q8VC34 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.04■□□□□ -0
Rpap2Q8VC34 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Rpap2Q8VC34 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpap2Q8VC34 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
Rpap2Q8VC34 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.03■□□□□ -0
Rpap2Q8VC34 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Rpap2Q8VC34 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.03■□□□□ -0
Rpap2Q8VC34 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Gm27437-201ENSMUST00000183429 107 ntBASIC15.03■□□□□ -0
Rpap2Q8VC34 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.03■□□□□ -0
Rpap2Q8VC34 Gm43094-201ENSMUST00000196549 921 ntBASIC15.03■□□□□ -0
Rpap2Q8VC34 Gm44855-201ENSMUST00000205725 362 ntBASIC15.03■□□□□ -0
Rpap2Q8VC34 Gm6218-201ENSMUST00000219812 628 ntBASIC15.03■□□□□ -0
Rpap2Q8VC34 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rpap2Q8VC34 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rpap2Q8VC34 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms