Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 RN7SL618P-201ENST00000477850 296 ntBASIC11.45□□□□□ -0.58
CSMD3Q7Z407 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 ELK2AP-201ENST00000392510 1007 ntBASIC11.45□□□□□ -0.58
CSMD3Q7Z407 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 AL033527.5-202ENST00000641632 1098 ntBASIC11.45□□□□□ -0.58
CSMD3Q7Z407 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.45□□□□□ -0.58
CSMD3Q7Z407 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.44□□□□□ -0.58
CSMD3Q7Z407 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 AC067852.2-201ENST00000590513 2313 ntBASIC11.44□□□□□ -0.58
CSMD3Q7Z407 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 COMP-202ENST00000425807 2292 ntTSL 2 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 MIR663B-201ENST00000408361 115 ntBASIC11.44□□□□□ -0.58
CSMD3Q7Z407 SPDYE17-201ENST00000412399 783 ntBASIC11.44□□□□□ -0.58
CSMD3Q7Z407 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 C2orf69P2-201ENST00000562032 1123 ntBASIC11.44□□□□□ -0.58
CSMD3Q7Z407 MPDU1-223ENST00000582151 728 ntBASIC11.44□□□□□ -0.58
CSMD3Q7Z407 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.44□□□□□ -0.58
CSMD3Q7Z407 PCDHB17P-201ENST00000539533 2393 ntBASIC11.43□□□□□ -0.58
CSMD3Q7Z407 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CSMD3Q7Z407 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
CSMD3Q7Z407 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC11.43□□□□□ -0.58
CSMD3Q7Z407 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CSMD3Q7Z407 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CSMD3Q7Z407 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC11.43□□□□□ -0.58
CSMD3Q7Z407 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms