Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 AC154572.2-201ENSMUST00000225105 997 ntBASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 CT030684.1-201ENSMUST00000227292 914 ntBASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm37795-201ENSMUST00000194216 2459 ntBASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm14371-201ENSMUST00000138925 1518 ntBASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm6226-201ENSMUST00000117765 1146 ntBASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Rpph1-201ENSMUST00000175096 319 ntBASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 AC174742.1-201ENSMUST00000218272 304 ntBASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm45003-201ENSMUST00000205875 2158 ntBASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm9924-202ENSMUST00000192760 2311 ntBASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms