Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-4Q9EQM3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-4Q9EQM3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-4Q9EQM3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-4Q9EQM3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-4Q9EQM3 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.02□□□□□ -0.16
Nkx2-4Q9EQM3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-4Q9EQM3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-4Q9EQM3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.02□□□□□ -0.16
Nkx2-4Q9EQM3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.02□□□□□ -0.16
Nkx2-4Q9EQM3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-4Q9EQM3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-4Q9EQM3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-4Q9EQM3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Gm12403-201ENSMUST00000121384 959 ntBASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Gm37986-201ENSMUST00000193285 383 ntBASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkx2-4Q9EQM3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms