Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Mir698-201ENSMUST00000102164 109 ntBASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Gm13385-201ENSMUST00000121089 220 ntBASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne8Q9DC53 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cpne8Q9DC53 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpne8Q9DC53 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cpne8Q9DC53 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Cpne8Q9DC53 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cpne8Q9DC53 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpne8Q9DC53 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpne8Q9DC53 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Cpne8Q9DC53 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Gm27680-201ENSMUST00000184192 160 ntBASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne8Q9DC53 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Gm9063-201ENSMUST00000223299 582 ntBASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.32□□□□□ -0.12
Cpne8Q9DC53 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms