Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AL078644.1-201ENST00000609881 752 ntBASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH20Q8N6Y1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 PCDHB19P-201ENST00000570871 2371 ntBASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 FAM58CP-201ENST00000435741 640 ntBASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 AC087641.1-201ENST00000557561 1021 ntBASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 AP001350.2-201ENST00000625104 1094 ntBASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH20Q8N6Y1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 AGGF1P2-201ENST00000426656 2106 ntBASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 HMGA1P7-201ENST00000406908 502 ntBASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 AC140658.5-201ENST00000438532 169 ntBASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 ACTG1P14-201ENST00000446382 1122 ntBASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 AP002472.1-201ENST00000577490 586 ntBASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 AC091812.2-201ENST00000619081 385 ntBASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 SLC22A20-204ENST00000530038 1673 ntBASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 AC131009.4-201ENST00000624048 1740 ntBASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 PCDH8P1-201ENST00000428983 2773 ntBASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PCDH20Q8N6Y1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH20Q8N6Y1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH20Q8N6Y1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PCDH20Q8N6Y1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH20Q8N6Y1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDH20Q8N6Y1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH20Q8N6Y1 PCDHA14-201ENST00000506751 2298 ntBASIC17.08■□□□□ 0.33
PCDH20Q8N6Y1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDH20Q8N6Y1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH20Q8N6Y1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH20Q8N6Y1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms