Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.15□□□□□ -0.46
Sec61a1P61620 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sec61a1P61620 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Sec61a1P61620 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.15□□□□□ -0.46
Sec61a1P61620 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sec61a1P61620 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sec61a1P61620 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sec61a1P61620 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Sec61a1P61620 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sec61a1P61620 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Sec61a1P61620 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sec61a1P61620 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Sec61a1P61620 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.14□□□□□ -0.47
Sec61a1P61620 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Gm25287-201ENSMUST00000103846 110 ntBASIC12.14□□□□□ -0.47
Sec61a1P61620 Gm22918-201ENSMUST00000103855 110 ntBASIC12.14□□□□□ -0.47
Sec61a1P61620 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.14□□□□□ -0.47
Sec61a1P61620 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.14□□□□□ -0.47
Sec61a1P61620 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Sec61a1P61620 Gm22175-201ENSMUST00000175007 78 ntBASIC12.14□□□□□ -0.47
Sec61a1P61620 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sec61a1P61620 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.14□□□□□ -0.47
Sec61a1P61620 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a1P61620 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.13□□□□□ -0.47
Sec61a1P61620 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sec61a1P61620 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sec61a1P61620 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sec61a1P61620 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.13□□□□□ -0.47
Sec61a1P61620 AA543401-201ENSMUST00000164248 1269 ntBASIC12.13□□□□□ -0.47
Sec61a1P61620 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Sec61a1P61620 Gm38225-201ENSMUST00000194001 393 ntBASIC12.13□□□□□ -0.47
Sec61a1P61620 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.13□□□□□ -0.47
Sec61a1P61620 Gm44872-201ENSMUST00000207864 420 ntBASIC12.13□□□□□ -0.47
Sec61a1P61620 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.13□□□□□ -0.47
Sec61a1P61620 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.13□□□□□ -0.47
Sec61a1P61620 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61a1P61620 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sec61a1P61620 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms