Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.79■□□□□ 0.6
TM4SF4P48230 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF4P48230 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF4P48230 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF4P48230 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.79■□□□□ 0.6
TM4SF4P48230 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TM4SF4P48230 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.78■□□□□ 0.6
TM4SF4P48230 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.78■□□□□ 0.6
TM4SF4P48230 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TM4SF4P48230 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF4P48230 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TM4SF4P48230 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF4P48230 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.78■□□□□ 0.6
TM4SF4P48230 HIST3H2BA-201ENST00000436555 524 ntBASIC18.78■□□□□ 0.6
TM4SF4P48230 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.78■□□□□ 0.6
TM4SF4P48230 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.78■□□□□ 0.6
TM4SF4P48230 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.78■□□□□ 0.6
TM4SF4P48230 C2orf69P2-201ENST00000562032 1123 ntBASIC18.78■□□□□ 0.6
TM4SF4P48230 AC106872.11-201ENST00000605838 421 ntBASIC18.78■□□□□ 0.6
TM4SF4P48230 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF4P48230 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TM4SF4P48230 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.78■□□□□ 0.6
TM4SF4P48230 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.78■□□□□ 0.6
TM4SF4P48230 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF4P48230 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.78■□□□□ 0.6
TM4SF4P48230 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.78■□□□□ 0.6
TM4SF4P48230 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF4P48230 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF4P48230 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.78■□□□□ 0.6
TM4SF4P48230 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF4P48230 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.77■□□□□ 0.6
TM4SF4P48230 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
TM4SF4P48230 TUBB8P12-201ENST00000308911 1335 ntBASIC18.77■□□□□ 0.6
TM4SF4P48230 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF4P48230 TUBB7P-202ENST00000428444 1305 ntBASIC18.77■□□□□ 0.6
TM4SF4P48230 TUBB8P7-204ENST00000567960 1332 ntBASIC18.77■□□□□ 0.6
TM4SF4P48230 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF4P48230 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF4P48230 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.77■□□□□ 0.6
TM4SF4P48230 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.77■□□□□ 0.6
TM4SF4P48230 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF4P48230 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.77■□□□□ 0.6
TM4SF4P48230 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TM4SF4P48230 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF4P48230 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.77■□□□□ 0.6
TM4SF4P48230 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF4P48230 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.77■□□□□ 0.6
TM4SF4P48230 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.77■□□□□ 0.6
TM4SF4P48230 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.77■□□□□ 0.6
TM4SF4P48230 AC020765.3-201ENST00000613051 740 ntBASIC18.77■□□□□ 0.6
TM4SF4P48230 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.77■□□□□ 0.6
TM4SF4P48230 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF4P48230 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.77■□□□□ 0.6
TM4SF4P48230 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.77■□□□□ 0.6
TM4SF4P48230 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF4P48230 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF4P48230 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.77■□□□□ 0.6
TM4SF4P48230 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TM4SF4P48230 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TM4SF4P48230 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TM4SF4P48230 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TM4SF4P48230 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.76■□□□□ 0.59
TM4SF4P48230 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.76■□□□□ 0.59
TM4SF4P48230 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF4P48230 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF4P48230 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TM4SF4P48230 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.76■□□□□ 0.59
TM4SF4P48230 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF4P48230 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.76■□□□□ 0.59
TM4SF4P48230 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF4P48230 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.76■□□□□ 0.59
TM4SF4P48230 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.76■□□□□ 0.59
TM4SF4P48230 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.76■□□□□ 0.59
TM4SF4P48230 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF4P48230 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.76■□□□□ 0.59
TM4SF4P48230 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.76■□□□□ 0.59
TM4SF4P48230 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.76■□□□□ 0.59
TM4SF4P48230 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.76■□□□□ 0.59
TM4SF4P48230 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF4P48230 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
TM4SF4P48230 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.76■□□□□ 0.59
TM4SF4P48230 ABALON-201ENST00000629058 1903 ntBASIC18.76■□□□□ 0.59
TM4SF4P48230 AC093503.3-201ENST00000624917 2352 ntBASIC18.76■□□□□ 0.59
TM4SF4P48230 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF4P48230 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF4P48230 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.75■□□□□ 0.59
TM4SF4P48230 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.75■□□□□ 0.59
TM4SF4P48230 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.75■□□□□ 0.59
TM4SF4P48230 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.75■□□□□ 0.59
TM4SF4P48230 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.75■□□□□ 0.59
TM4SF4P48230 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.75■□□□□ 0.59
TM4SF4P48230 AP001889.1-201ENST00000525414 633 ntBASIC18.75■□□□□ 0.59
TM4SF4P48230 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms