Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc9P09633 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hoxc9P09633 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hoxc9P09633 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc9P09633 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc9P09633 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc9P09633 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc9P09633 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.7■□□□□ 0.42
Hoxc9P09633 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc9P09633 Gm3961-201ENSMUST00000204425 994 ntBASIC17.7■□□□□ 0.42
Hoxc9P09633 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc9P09633 Gm4935-201ENSMUST00000221316 1198 ntBASIC17.7■□□□□ 0.42
Hoxc9P09633 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.7■□□□□ 0.42
Hoxc9P09633 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc9P09633 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Hoxc9P09633 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Hoxc9P09633 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc9P09633 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc9P09633 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc9P09633 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc9P09633 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc9P09633 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc9P09633 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.69■□□□□ 0.42
Hoxc9P09633 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.69■□□□□ 0.42
Hoxc9P09633 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Hoxc9P09633 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.69■□□□□ 0.42
Hoxc9P09633 Gm6447-201ENSMUST00000118905 835 ntBASIC17.69■□□□□ 0.42
Hoxc9P09633 Gm13350-201ENSMUST00000120519 479 ntBASIC17.69■□□□□ 0.42
Hoxc9P09633 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Gm6222-202ENSMUST00000182143 629 ntBASIC17.69■□□□□ 0.42
Hoxc9P09633 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.69■□□□□ 0.42
Hoxc9P09633 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc9P09633 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hoxc9P09633 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.68■□□□□ 0.42
Hoxc9P09633 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc9P09633 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc9P09633 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc9P09633 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc9P09633 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Hoxc9P09633 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hoxc9P09633 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc9P09633 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc9P09633 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc9P09633 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hoxc9P09633 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Hoxc9P09633 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.68■□□□□ 0.42
Hoxc9P09633 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc9P09633 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC17.68■□□□□ 0.42
Hoxc9P09633 Gm38241-201ENSMUST00000192641 898 ntBASIC17.68■□□□□ 0.42
Hoxc9P09633 Gm38266-201ENSMUST00000194931 421 ntBASIC17.68■□□□□ 0.42
Hoxc9P09633 Olfr284-202ENSMUST00000206647 966 ntBASIC17.68■□□□□ 0.42
Hoxc9P09633 AC154462.2-201ENSMUST00000227519 370 ntBASIC17.68■□□□□ 0.42
Hoxc9P09633 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc9P09633 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc9P09633 Gm24526-201ENSMUST00000082921 158 ntBASIC17.68■□□□□ 0.42
Hoxc9P09633 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc9P09633 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc9P09633 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.68■□□□□ 0.42
Hoxc9P09633 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hoxc9P09633 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc9P09633 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hoxc9P09633 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc9P09633 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc9P09633 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc9P09633 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hoxc9P09633 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Hoxc9P09633 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc9P09633 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc9P09633 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.67■□□□□ 0.42
Hoxc9P09633 Gm42627-201ENSMUST00000197347 224 ntBASIC17.67■□□□□ 0.42
Hoxc9P09633 Gm7783-201ENSMUST00000204795 781 ntBASIC17.67■□□□□ 0.42
Hoxc9P09633 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hoxc9P09633 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc9P09633 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc9P09633 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc9P09633 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc9P09633 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.67■□□□□ 0.42
Hoxc9P09633 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc9P09633 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc9P09633 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Hoxc9P09633 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hoxc9P09633 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc9P09633 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms