Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav12-1A0N8R1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Gm27741-201ENSMUST00000185060 237 ntBASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Gm18766-201ENSMUST00000189811 808 ntBASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav12-1A0N8R1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Gm13365-201ENSMUST00000121188 973 ntBASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Dupd1-202ENSMUST00000224735 548 ntBASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Mir497b-201ENSMUST00000093601 125 ntBASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav12-1A0N8R1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav12-1A0N8R1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms