Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Gm2810-201ENSMUST00000118681 990 ntBASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Rprl2-201ENSMUST00000157150 290 ntBASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Gm20553-201ENSMUST00000204205 844 ntBASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Gm10175-201ENSMUST00000086013 645 ntBASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Ska1Q9CPV1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Gm25927-201ENSMUST00000175058 117 ntBASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Gm38225-201ENSMUST00000194001 393 ntBASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ska1Q9CPV1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13□□□□□ -0.33
Ska1Q9CPV1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13□□□□□ -0.33
Ska1Q9CPV1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ska1Q9CPV1 Gm9924-202ENSMUST00000192760 2311 ntBASIC13□□□□□ -0.33
Ska1Q9CPV1 Gm44414-201ENSMUST00000203660 2109 ntBASIC13□□□□□ -0.33
Ska1Q9CPV1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ska1Q9CPV1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ska1Q9CPV1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ska1Q9CPV1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13□□□□□ -0.33
Ska1Q9CPV1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Gm43514-201ENSMUST00000198852 424 ntBASIC13□□□□□ -0.33
Ska1Q9CPV1 AC166341.4-201ENSMUST00000220625 123 ntBASIC13□□□□□ -0.33
Ska1Q9CPV1 AC131187.1-201ENSMUST00000224567 809 ntBASIC13□□□□□ -0.33
Ska1Q9CPV1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ska1Q9CPV1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms