Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.49□□□□□ -0.25
Trim16Q99PP9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim16Q99PP9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Gm27618-201ENSMUST00000183671 60 ntBASIC13.49□□□□□ -0.25
Trim16Q99PP9 Gm27622-201ENSMUST00000183779 60 ntBASIC13.49□□□□□ -0.25
Trim16Q99PP9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.49□□□□□ -0.25
Trim16Q99PP9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim16Q99PP9 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.49□□□□□ -0.25
Trim16Q99PP9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.48□□□□□ -0.25
Trim16Q99PP9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.48□□□□□ -0.25
Trim16Q99PP9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 BC001981-202ENSMUST00000191393 1545 ntBASIC13.48□□□□□ -0.25
Trim16Q99PP9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim16Q99PP9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Gm24543-201ENSMUST00000103867 82 ntBASIC13.47□□□□□ -0.25
Trim16Q99PP9 Gm15920-201ENSMUST00000118998 402 ntBASIC13.47□□□□□ -0.25
Trim16Q99PP9 Gm12882-201ENSMUST00000121696 517 ntBASIC13.47□□□□□ -0.25
Trim16Q99PP9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Gm25144-201ENSMUST00000179561 110 ntBASIC13.47□□□□□ -0.25
Trim16Q99PP9 Gm25352-201ENSMUST00000179815 110 ntBASIC13.47□□□□□ -0.25
Trim16Q99PP9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Gm38294-201ENSMUST00000192831 381 ntBASIC13.47□□□□□ -0.25
Trim16Q99PP9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim16Q99PP9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim16Q99PP9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.47□□□□□ -0.25
Trim16Q99PP9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim16Q99PP9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms