Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clip4Q8CI96 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Clip4Q8CI96 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clip4Q8CI96 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clip4Q8CI96 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clip4Q8CI96 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clip4Q8CI96 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clip4Q8CI96 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clip4Q8CI96 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Clip4Q8CI96 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clip4Q8CI96 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clip4Q8CI96 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clip4Q8CI96 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Gm10275-202ENSMUST00000168697 495 ntBASIC13.91□□□□□ -0.18
Clip4Q8CI96 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.91□□□□□ -0.18
Clip4Q8CI96 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.91□□□□□ -0.18
Clip4Q8CI96 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Gm10275-201ENSMUST00000092620 635 ntBASIC13.91□□□□□ -0.18
Clip4Q8CI96 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.91□□□□□ -0.18
Clip4Q8CI96 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clip4Q8CI96 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Gm14057-201ENSMUST00000120631 482 ntBASIC13.9□□□□□ -0.18
Clip4Q8CI96 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Gm27680-201ENSMUST00000184192 160 ntBASIC13.9□□□□□ -0.18
Clip4Q8CI96 Gm27989-201ENSMUST00000184721 107 ntBASIC13.9□□□□□ -0.18
Clip4Q8CI96 Gm44344-201ENSMUST00000200287 129 ntBASIC13.9□□□□□ -0.18
Clip4Q8CI96 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Gm45453-201ENSMUST00000211758 853 ntBASIC13.9□□□□□ -0.18
Clip4Q8CI96 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Gm16476-201ENSMUST00000221544 139 ntBASIC13.9□□□□□ -0.18
Clip4Q8CI96 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.9□□□□□ -0.18
Clip4Q8CI96 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clip4Q8CI96 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Clip4Q8CI96 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Clip4Q8CI96 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Clip4Q8CI96 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Clip4Q8CI96 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clip4Q8CI96 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms