Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sox30Q8CGW4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox30Q8CGW4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox30Q8CGW4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sox30Q8CGW4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sox30Q8CGW4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.05■□□□□ 0
Sox30Q8CGW4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Sox30Q8CGW4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Sox30Q8CGW4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox30Q8CGW4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox30Q8CGW4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Sox30Q8CGW4 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox30Q8CGW4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Sox30Q8CGW4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Sox30Q8CGW4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox30Q8CGW4 Gm15653-201ENSMUST00000119247 907 ntBASIC15.05■□□□□ -0
Sox30Q8CGW4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sox30Q8CGW4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sox30Q8CGW4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sox30Q8CGW4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.05■□□□□ -0
Sox30Q8CGW4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.05■□□□□ -0
Sox30Q8CGW4 Gm28630-201ENSMUST00000187806 498 ntBASIC15.05■□□□□ -0
Sox30Q8CGW4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.05■□□□□ -0
Sox30Q8CGW4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sox30Q8CGW4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Sox30Q8CGW4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox30Q8CGW4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.05■□□□□ -0
Sox30Q8CGW4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox30Q8CGW4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox30Q8CGW4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox30Q8CGW4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sox30Q8CGW4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox30Q8CGW4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sox30Q8CGW4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox30Q8CGW4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.05■□□□□ -0
Sox30Q8CGW4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sox30Q8CGW4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox30Q8CGW4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sox30Q8CGW4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sox30Q8CGW4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox30Q8CGW4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sox30Q8CGW4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox30Q8CGW4 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox30Q8CGW4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sox30Q8CGW4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox30Q8CGW4 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.04■□□□□ -0
Sox30Q8CGW4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.04■□□□□ -0
Sox30Q8CGW4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox30Q8CGW4 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.04■□□□□ -0
Sox30Q8CGW4 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.04■□□□□ -0
Sox30Q8CGW4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox30Q8CGW4 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.04■□□□□ -0
Sox30Q8CGW4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox30Q8CGW4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox30Q8CGW4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sox30Q8CGW4 Gm24543-201ENSMUST00000103867 82 ntBASIC15.04■□□□□ -0
Sox30Q8CGW4 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.04■□□□□ -0
Sox30Q8CGW4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sox30Q8CGW4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sox30Q8CGW4 Gm43125-201ENSMUST00000201724 730 ntBASIC15.04■□□□□ -0
Sox30Q8CGW4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.04■□□□□ -0
Sox30Q8CGW4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox30Q8CGW4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sox30Q8CGW4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sox30Q8CGW4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox30Q8CGW4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sox30Q8CGW4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox30Q8CGW4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.04■□□□□ -0
Sox30Q8CGW4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sox30Q8CGW4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sox30Q8CGW4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sox30Q8CGW4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Sox30Q8CGW4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.03■□□□□ -0
Sox30Q8CGW4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sox30Q8CGW4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.03■□□□□ -0
Sox30Q8CGW4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sox30Q8CGW4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.03■□□□□ -0
Sox30Q8CGW4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox30Q8CGW4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms