Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 COX10-202ENST00000429152 875 ntTSL 2 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 AL591424.1-201ENST00000442569 1213 ntBASIC11.18□□□□□ -0.62
SCXQ7RTU7 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.18□□□□□ -0.62
SCXQ7RTU7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 AC034105.1-201ENST00000563488 319 ntBASIC11.18□□□□□ -0.62
SCXQ7RTU7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 AL356488.2-201ENST00000602755 427 ntBASIC11.18□□□□□ -0.62
SCXQ7RTU7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 FAM197Y3-203ENST00000618346 717 ntBASIC11.18□□□□□ -0.62
SCXQ7RTU7 MIR1199-201ENST00000621445 119 ntBASIC11.18□□□□□ -0.62
SCXQ7RTU7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 SBF1P1-201ENST00000444527 5631 ntBASIC11.18□□□□□ -0.62
SCXQ7RTU7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
SCXQ7RTU7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SCXQ7RTU7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC11.17□□□□□ -0.62
SCXQ7RTU7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 AC103564.2-201ENST00000432853 1299 ntBASIC11.17□□□□□ -0.62
SCXQ7RTU7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 DUTP2-201ENST00000519164 463 ntBASIC11.17□□□□□ -0.62
SCXQ7RTU7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 AC006557.2-201ENST00000592985 1240 ntBASIC11.17□□□□□ -0.62
SCXQ7RTU7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 AD001527.2-201ENST00000622994 785 ntBASIC11.17□□□□□ -0.62
SCXQ7RTU7 AC073592.4-201ENST00000623827 446 ntBASIC11.17□□□□□ -0.62
SCXQ7RTU7 AC073592.5-201ENST00000624854 528 ntBASIC11.17□□□□□ -0.62
SCXQ7RTU7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms