Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a2Q07643 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a2Q07643 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.88□□□□□ -0.03
Col9a2Q07643 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a2Q07643 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a2Q07643 Gm4984-201ENSMUST00000115987 360 ntBASIC14.88□□□□□ -0.03
Col9a2Q07643 Gm8810-201ENSMUST00000172895 754 ntBASIC14.88□□□□□ -0.03
Col9a2Q07643 Gm42550-201ENSMUST00000201553 960 ntBASIC14.88□□□□□ -0.03
Col9a2Q07643 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.88□□□□□ -0.03
Col9a2Q07643 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.88□□□□□ -0.03
Col9a2Q07643 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a2Q07643 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a2Q07643 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a2Q07643 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col9a2Q07643 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a2Q07643 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Col9a2Q07643 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a2Q07643 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a2Q07643 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.88□□□□□ -0.03
Col9a2Q07643 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a2Q07643 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a2Q07643 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.87□□□□□ -0.03
Col9a2Q07643 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.87□□□□□ -0.03
Col9a2Q07643 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.87□□□□□ -0.03
Col9a2Q07643 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.87□□□□□ -0.03
Col9a2Q07643 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.87□□□□□ -0.03
Col9a2Q07643 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.87□□□□□ -0.03
Col9a2Q07643 Gm38671-201ENSMUST00000200573 130 ntBASIC14.87□□□□□ -0.03
Col9a2Q07643 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col9a2Q07643 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.87□□□□□ -0.03
Col9a2Q07643 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.87□□□□□ -0.03
Col9a2Q07643 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a2Q07643 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Col9a2Q07643 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.86□□□□□ -0.03
Col9a2Q07643 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.86□□□□□ -0.03
Col9a2Q07643 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.86□□□□□ -0.03
Col9a2Q07643 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Gm23931-201ENSMUST00000103842 109 ntBASIC14.86□□□□□ -0.03
Col9a2Q07643 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.86□□□□□ -0.03
Col9a2Q07643 Gm24196-201ENSMUST00000179161 110 ntBASIC14.86□□□□□ -0.03
Col9a2Q07643 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.86□□□□□ -0.03
Col9a2Q07643 Gm29127-201ENSMUST00000188304 517 ntBASIC14.86□□□□□ -0.03
Col9a2Q07643 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.86□□□□□ -0.03
Col9a2Q07643 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.86□□□□□ -0.03
Col9a2Q07643 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.86□□□□□ -0.03
Col9a2Q07643 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col9a2Q07643 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.86□□□□□ -0.03
Col9a2Q07643 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Col9a2Q07643 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.86□□□□□ -0.03
Col9a2Q07643 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.86□□□□□ -0.03
Col9a2Q07643 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Col9a2Q07643 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a2Q07643 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.85□□□□□ -0.03
Col9a2Q07643 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col9a2Q07643 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.85□□□□□ -0.03
Col9a2Q07643 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.85□□□□□ -0.03
Col9a2Q07643 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Gm13226-201ENSMUST00000117838 404 ntBASIC14.85□□□□□ -0.03
Col9a2Q07643 Gm11814-201ENSMUST00000119515 929 ntBASIC14.85□□□□□ -0.03
Col9a2Q07643 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.85□□□□□ -0.03
Col9a2Q07643 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms