Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14□□□□□ -0.17
Gabpb1Q00420 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Gabpb1Q00420 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14□□□□□ -0.17
Gabpb1Q00420 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14□□□□□ -0.17
Gabpb1Q00420 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Gabpb1Q00420 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14□□□□□ -0.17
Gabpb1Q00420 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14□□□□□ -0.17
Gabpb1Q00420 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14□□□□□ -0.17
Gabpb1Q00420 Gm18934-201ENSMUST00000216671 1044 ntBASIC14□□□□□ -0.17
Gabpb1Q00420 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14□□□□□ -0.17
Gabpb1Q00420 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14□□□□□ -0.17
Gabpb1Q00420 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Gm14752-201ENSMUST00000120719 2075 ntBASIC14□□□□□ -0.17
Gabpb1Q00420 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14□□□□□ -0.17
Gabpb1Q00420 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Gabpb1Q00420 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gabpb1Q00420 Gm45779-201ENSMUST00000212189 4064 ntBASIC14□□□□□ -0.17
Gabpb1Q00420 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.99□□□□□ -0.17
Gabpb1Q00420 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Gm15920-201ENSMUST00000118998 402 ntBASIC13.99□□□□□ -0.17
Gabpb1Q00420 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gabpb1Q00420 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.98□□□□□ -0.17
Gabpb1Q00420 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.98□□□□□ -0.17
Gabpb1Q00420 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Gm13223-201ENSMUST00000118609 747 ntBASIC13.98□□□□□ -0.17
Gabpb1Q00420 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Gm44872-201ENSMUST00000207864 420 ntBASIC13.98□□□□□ -0.17
Gabpb1Q00420 Gm7775-201ENSMUST00000218871 853 ntBASIC13.98□□□□□ -0.17
Gabpb1Q00420 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Gm9063-201ENSMUST00000223299 582 ntBASIC13.98□□□□□ -0.17
Gabpb1Q00420 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabpb1Q00420 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms