Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.56□□□□□ -0.56
SgcaP82350 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.56□□□□□ -0.56
SgcaP82350 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.56□□□□□ -0.56
SgcaP82350 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.56□□□□□ -0.56
SgcaP82350 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.56□□□□□ -0.56
SgcaP82350 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.56□□□□□ -0.56
SgcaP82350 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.56□□□□□ -0.56
SgcaP82350 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
SgcaP82350 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
SgcaP82350 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SgcaP82350 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.56□□□□□ -0.56
SgcaP82350 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SgcaP82350 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.56□□□□□ -0.56
SgcaP82350 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcaP82350 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SgcaP82350 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.55□□□□□ -0.56
SgcaP82350 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.55□□□□□ -0.56
SgcaP82350 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
SgcaP82350 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SgcaP82350 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Gm6550-201ENSMUST00000187574 993 ntBASIC11.55□□□□□ -0.56
SgcaP82350 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.55□□□□□ -0.56
SgcaP82350 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.55□□□□□ -0.56
SgcaP82350 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.55□□□□□ -0.56
SgcaP82350 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.55□□□□□ -0.56
SgcaP82350 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.55□□□□□ -0.56
SgcaP82350 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.55□□□□□ -0.56
SgcaP82350 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
SgcaP82350 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.55□□□□□ -0.56
SgcaP82350 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SgcaP82350 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgcaP82350 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
SgcaP82350 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
SgcaP82350 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SgcaP82350 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SgcaP82350 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.54□□□□□ -0.56
SgcaP82350 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.54□□□□□ -0.56
SgcaP82350 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.54□□□□□ -0.56
SgcaP82350 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
SgcaP82350 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.54□□□□□ -0.56
SgcaP82350 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SgcaP82350 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
SgcaP82350 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
SgcaP82350 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Gm16026-204ENSMUST00000162652 683 ntBASIC11.54□□□□□ -0.56
SgcaP82350 Gm28033-201ENSMUST00000184224 96 ntBASIC11.54□□□□□ -0.56
SgcaP82350 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SgcaP82350 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.54□□□□□ -0.56
SgcaP82350 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms