Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LBX1P52954 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LBX1P52954 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.61■□□□□ 0.57
LBX1P52954 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LBX1P52954 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.61■□□□□ 0.57
LBX1P52954 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LBX1P52954 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LBX1P52954 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LBX1P52954 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LBX1P52954 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.61■□□□□ 0.57
LBX1P52954 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LBX1P52954 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.61■□□□□ 0.57
LBX1P52954 RPL13AP19-201ENST00000434320 584 ntBASIC18.61■□□□□ 0.57
LBX1P52954 AC069218.1-201ENST00000435269 762 ntBASIC18.61■□□□□ 0.57
LBX1P52954 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.61■□□□□ 0.57
LBX1P52954 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LBX1P52954 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LBX1P52954 MIR4741-201ENST00000579822 90 ntBASIC18.61■□□□□ 0.57
LBX1P52954 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.61■□□□□ 0.57
LBX1P52954 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.61■□□□□ 0.57
LBX1P52954 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LBX1P52954 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LBX1P52954 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.61■□□□□ 0.57
LBX1P52954 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LBX1P52954 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LBX1P52954 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
LBX1P52954 MSTO2P-201ENST00000314835 1709 ntBASIC18.6■□□□□ 0.57
LBX1P52954 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LBX1P52954 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
LBX1P52954 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LBX1P52954 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.6■□□□□ 0.57
LBX1P52954 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LBX1P52954 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 SERF2-206ENST00000409291 807 ntTSL 3 BASIC18.6■□□□□ 0.57
LBX1P52954 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.6■□□□□ 0.57
LBX1P52954 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LBX1P52954 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.6■□□□□ 0.57
LBX1P52954 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.6■□□□□ 0.57
LBX1P52954 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.6■□□□□ 0.57
LBX1P52954 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.6■□□□□ 0.57
LBX1P52954 AL391069.4-201ENST00000609583 481 ntBASIC18.6■□□□□ 0.57
LBX1P52954 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.6■□□□□ 0.57
LBX1P52954 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LBX1P52954 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.6■□□□□ 0.57
LBX1P52954 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.6■□□□□ 0.57
LBX1P52954 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.6■□□□□ 0.57
LBX1P52954 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LBX1P52954 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LBX1P52954 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LBX1P52954 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.59■□□□□ 0.57
LBX1P52954 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LBX1P52954 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.59■□□□□ 0.57
LBX1P52954 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LBX1P52954 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.59■□□□□ 0.57
LBX1P52954 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.59■□□□□ 0.57
LBX1P52954 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LBX1P52954 AC006480.2-201ENST00000609770 1337 ntBASIC18.59■□□□□ 0.57
LBX1P52954 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.59■□□□□ 0.57
LBX1P52954 AC073592.3-201ENST00000625118 1834 ntBASIC18.59■□□□□ 0.57
LBX1P52954 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LBX1P52954 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LBX1P52954 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LBX1P52954 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.59■□□□□ 0.57
LBX1P52954 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.59■□□□□ 0.57
LBX1P52954 AC134698.3-201ENST00000523880 214 ntBASIC18.59■□□□□ 0.57
LBX1P52954 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.59■□□□□ 0.57
LBX1P52954 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LBX1P52954 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LBX1P52954 MIR3147-201ENST00000577811 66 ntBASIC18.59■□□□□ 0.57
LBX1P52954 MIR3907-201ENST00000579424 151 ntBASIC18.59■□□□□ 0.57
LBX1P52954 AC024267.1-201ENST00000582320 895 ntBASIC18.59■□□□□ 0.57
LBX1P52954 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LBX1P52954 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LBX1P52954 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LBX1P52954 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LBX1P52954 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LBX1P52954 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LBX1P52954 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LBX1P52954 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LBX1P52954 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.59■□□□□ 0.57
LBX1P52954 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LBX1P52954 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LBX1P52954 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.59■□□□□ 0.57
LBX1P52954 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.58■□□□□ 0.57
LBX1P52954 KRT8P37-201ENST00000451609 1420 ntBASIC18.58■□□□□ 0.57
LBX1P52954 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms