Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Gm13418-201ENSMUST00000119097 944 ntBASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Gm16026-204ENSMUST00000162652 683 ntBASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Gm23634-201ENSMUST00000175071 91 ntBASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Gm6089-201ENSMUST00000197666 938 ntBASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Pck2-205ENSMUST00000226352 2784 ntBASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav7n-4A0A075B620 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Gm7222-201ENSMUST00000117512 906 ntBASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Gm11764-201ENSMUST00000120221 623 ntBASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Gm5479-201ENSMUST00000160578 435 ntBASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav7n-4A0A075B620 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav7n-4A0A075B620 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav7n-4A0A075B620 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav7n-4A0A075B620 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav7n-4A0A075B620 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav7n-4A0A075B620 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav7n-4A0A075B620 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav7n-4A0A075B620 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav7n-4A0A075B620 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms