Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Mir5122-201ENSMUST00000175004 89 ntBASIC11.03□□□□□ -0.64
Smco4Q9JIS3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Smco4Q9JIS3 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smco4Q9JIS3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Smco4Q9JIS3 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Smco4Q9JIS3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smco4Q9JIS3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.02□□□□□ -0.64
Smco4Q9JIS3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smco4Q9JIS3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Gm11355-201ENSMUST00000121120 306 ntBASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Gm18101-201ENSMUST00000215769 548 ntBASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Gm30025-201ENSMUST00000218555 728 ntBASIC11.02□□□□□ -0.65
Smco4Q9JIS3 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco4Q9JIS3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.01□□□□□ -0.65
Smco4Q9JIS3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco4Q9JIS3 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms