Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Mir686-201ENSMUST00000102174 109 ntBASIC14.48□□□□□ -0.09
Clp1Q99LI9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.48□□□□□ -0.09
Clp1Q99LI9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.48□□□□□ -0.09
Clp1Q99LI9 Gm38341-201ENSMUST00000195357 515 ntBASIC14.48□□□□□ -0.09
Clp1Q99LI9 Gm9368-201ENSMUST00000219348 831 ntBASIC14.48□□□□□ -0.09
Clp1Q99LI9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Cts7-204ENSMUST00000225321 1257 ntBASIC14.48□□□□□ -0.09
Clp1Q99LI9 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.48□□□□□ -0.09
Clp1Q99LI9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clp1Q99LI9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.47□□□□□ -0.09
Clp1Q99LI9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.47□□□□□ -0.09
Clp1Q99LI9 Gm11618-201ENSMUST00000117946 267 ntBASIC14.47□□□□□ -0.09
Clp1Q99LI9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.47□□□□□ -0.09
Clp1Q99LI9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.47□□□□□ -0.09
Clp1Q99LI9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clp1Q99LI9 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.47□□□□□ -0.09
Clp1Q99LI9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.46□□□□□ -0.09
Clp1Q99LI9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.46□□□□□ -0.09
Clp1Q99LI9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clp1Q99LI9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms