Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AL035633.1-201ENST00000406139 838 ntBASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC85AQ96PX6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC85AQ96PX6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC85AQ96PX6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC85AQ96PX6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.77■□□□□ 0.91
CCDC85AQ96PX6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC85AQ96PX6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC85AQ96PX6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 AC107890.1-201ENST00000422478 521 ntBASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 MIR4745-201ENST00000577608 62 ntBASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 MIR3909-201ENST00000579518 119 ntBASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 AC084121.4-201ENST00000641598 221 ntBASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 AF228730.8-201ENST00000642140 221 ntBASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC85AQ96PX6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 PCDHB18P-201ENST00000524813 2368 ntBASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 MIR346-201ENST00000362234 95 ntBASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 UGT1A2P-201ENST00000454886 866 ntBASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 IGHV3-42-201ENST00000520410 361 ntBASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 MIR4453-201ENST00000584019 89 ntBASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 AL390754.1-201ENST00000619088 582 ntBASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 AC060834.1-201ENST00000443027 2032 ntBASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC85AQ96PX6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC85AQ96PX6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms