Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 AC105233.2-201ENST00000523697 349 ntBASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 AF228730.5-201ENST00000530288 346 ntBASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEFF1Q8IYR6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEFF1Q8IYR6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 COX5BP8-201ENST00000416911 349 ntBASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 KRT18P34-201ENST00000488218 1270 ntBASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 CYP2A7P1-201ENST00000595391 815 ntBASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 LINC00896-202ENST00000609602 2128 ntBASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 AC007967.4-201ENST00000614700 386 ntBASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEFF1Q8IYR6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.58■□□□□ 0.25
TMEFF1Q8IYR6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEFF1Q8IYR6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TMEFF1Q8IYR6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.58■□□□□ 0.25
TMEFF1Q8IYR6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms