Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pabpn1Q8CCS6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 AC126799.1-201ENSMUST00000221976 246 ntBASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pabpn1Q8CCS6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pabpn1Q8CCS6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pabpn1Q8CCS6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Pabpn1Q8CCS6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pabpn1Q8CCS6 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pabpn1Q8CCS6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pabpn1Q8CCS6 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pabpn1Q8CCS6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pabpn1Q8CCS6 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pabpn1Q8CCS6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pabpn1Q8CCS6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pabpn1Q8CCS6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Gm12948-201ENSMUST00000119406 682 ntBASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Gm12539-201ENSMUST00000121549 1098 ntBASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Aprt-ps-201ENSMUST00000212311 505 ntBASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Gm19640-201ENSMUST00000214849 464 ntBASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pabpn1Q8CCS6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Gm4864-201ENSMUST00000219894 1461 ntBASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Gm12058-201ENSMUST00000118614 437 ntBASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Gm6506-201ENSMUST00000119775 1136 ntBASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Gm8894-201ENSMUST00000074642 666 ntBASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Pabpn1Q8CCS6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pabpn1Q8CCS6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pabpn1Q8CCS6 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC20.87■□□□□ 0.93
Pabpn1Q8CCS6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pabpn1Q8CCS6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pabpn1Q8CCS6 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pabpn1Q8CCS6 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC20.87■□□□□ 0.93
Pabpn1Q8CCS6 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC20.87■□□□□ 0.93
Pabpn1Q8CCS6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC20.87■□□□□ 0.93
Pabpn1Q8CCS6 AC154184.3-201ENSMUST00000225620 1090 ntBASIC20.87■□□□□ 0.93
Pabpn1Q8CCS6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Pabpn1Q8CCS6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pabpn1Q8CCS6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pabpn1Q8CCS6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pabpn1Q8CCS6 Gm8228-201ENSMUST00000189949 2192 ntBASIC20.86■□□□□ 0.93
Pabpn1Q8CCS6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pabpn1Q8CCS6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Pabpn1Q8CCS6 Gm13600-201ENSMUST00000117949 744 ntBASIC20.86■□□□□ 0.93
Pabpn1Q8CCS6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC20.86■□□□□ 0.93
Pabpn1Q8CCS6 Gm37028-201ENSMUST00000194276 107 ntBASIC20.86■□□□□ 0.93
Pabpn1Q8CCS6 AC154290.1-201ENSMUST00000223786 1240 ntBASIC20.86■□□□□ 0.93
Pabpn1Q8CCS6 AC140375.1-201ENSMUST00000225421 694 ntBASIC20.86■□□□□ 0.93
Pabpn1Q8CCS6 Prrxl1-205ENSMUST00000228878 723 ntBASIC20.86■□□□□ 0.93
Pabpn1Q8CCS6 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pabpn1Q8CCS6 Gm10076-201ENSMUST00000073238 384 ntBASIC20.86■□□□□ 0.93
Pabpn1Q8CCS6 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms