Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Traf4Q61382 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Traf4Q61382 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Traf4Q61382 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Traf4Q61382 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.32□□□□□ -0.44
Traf4Q61382 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Traf4Q61382 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Traf4Q61382 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.31□□□□□ -0.44
Traf4Q61382 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Traf4Q61382 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Traf4Q61382 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Traf4Q61382 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.31□□□□□ -0.44
Traf4Q61382 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.31□□□□□ -0.44
Traf4Q61382 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Traf4Q61382 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.31□□□□□ -0.44
Traf4Q61382 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Traf4Q61382 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.31□□□□□ -0.44
Traf4Q61382 Gm15487-201ENSMUST00000122373 465 ntBASIC12.31□□□□□ -0.44
Traf4Q61382 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.31□□□□□ -0.44
Traf4Q61382 Gm27838-201ENSMUST00000184829 128 ntBASIC12.31□□□□□ -0.44
Traf4Q61382 Gm2451-201ENSMUST00000199447 999 ntBASIC12.31□□□□□ -0.44
Traf4Q61382 Gm10290-201ENSMUST00000200451 999 ntBASIC12.31□□□□□ -0.44
Traf4Q61382 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.31□□□□□ -0.44
Traf4Q61382 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.31□□□□□ -0.44
Traf4Q61382 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Traf4Q61382 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Traf4Q61382 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.31□□□□□ -0.44
Traf4Q61382 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Traf4Q61382 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Traf4Q61382 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.31□□□□□ -0.44
Traf4Q61382 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.3□□□□□ -0.44
Traf4Q61382 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
Traf4Q61382 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.3□□□□□ -0.44
Traf4Q61382 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Traf4Q61382 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.3□□□□□ -0.44
Traf4Q61382 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.3□□□□□ -0.44
Traf4Q61382 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Traf4Q61382 Gm5745-201ENSMUST00000183748 313 ntBASIC12.3□□□□□ -0.44
Traf4Q61382 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.3□□□□□ -0.44
Traf4Q61382 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.3□□□□□ -0.44
Traf4Q61382 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Traf4Q61382 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Traf4Q61382 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.3□□□□□ -0.44
Traf4Q61382 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Traf4Q61382 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Traf4Q61382 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.3□□□□□ -0.44
Traf4Q61382 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Traf4Q61382 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.3□□□□□ -0.44
Traf4Q61382 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Traf4Q61382 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.29□□□□□ -0.44
Traf4Q61382 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Traf4Q61382 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Traf4Q61382 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Traf4Q61382 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms