Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.44□□□□□ -0.58
Nkx2-1P50220 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.44□□□□□ -0.58
Nkx2-1P50220 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-1P50220 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.43□□□□□ -0.58
Nkx2-1P50220 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.43□□□□□ -0.58
Nkx2-1P50220 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.43□□□□□ -0.58
Nkx2-1P50220 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-1P50220 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.43□□□□□ -0.58
Nkx2-1P50220 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Gm14140-201ENSMUST00000119999 995 ntBASIC11.42□□□□□ -0.58
Nkx2-1P50220 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.42□□□□□ -0.58
Nkx2-1P50220 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Gm2445-201ENSMUST00000182798 989 ntBASIC11.42□□□□□ -0.58
Nkx2-1P50220 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.42□□□□□ -0.58
Nkx2-1P50220 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Gm7461-201ENSMUST00000058918 827 ntBASIC11.42□□□□□ -0.58
Nkx2-1P50220 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms