Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Xcl1P47993 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC8.92□□□□□ -0.98
Xcl1P47993 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC8.92□□□□□ -0.98
Xcl1P47993 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC8.92□□□□□ -0.98
Xcl1P47993 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Xcl1P47993 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Xcl1P47993 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Xcl1P47993 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Gm37014-201ENSMUST00000194723 2253 ntBASIC8.92□□□□□ -0.98
Xcl1P47993 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Xcl1P47993 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC8.91□□□□□ -0.98
Xcl1P47993 Gm6159-201ENSMUST00000191249 1724 ntBASIC8.91□□□□□ -0.98
Xcl1P47993 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Gm5385-201ENSMUST00000118988 1559 ntBASIC8.91□□□□□ -0.98
Xcl1P47993 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Xcl1P47993 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Xcl1P47993 Gm13474-201ENSMUST00000122466 815 ntBASIC8.91□□□□□ -0.98
Xcl1P47993 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC8.91□□□□□ -0.98
Xcl1P47993 Gm27463-201ENSMUST00000183569 57 ntBASIC8.91□□□□□ -0.98
Xcl1P47993 Gm27405-201ENSMUST00000184201 112 ntBASIC8.91□□□□□ -0.98
Xcl1P47993 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC8.91□□□□□ -0.98
Xcl1P47993 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Gm9987-201ENSMUST00000069768 567 ntBASIC8.91□□□□□ -0.98
Xcl1P47993 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Xcl1P47993 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Xcl1P47993 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC8.91□□□□□ -0.98
Xcl1P47993 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Xcl1P47993 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Xcl1P47993 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Xcl1P47993 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC8.91□□□□□ -0.98
Xcl1P47993 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Gm38385-201ENSMUST00000194454 2351 ntBASIC8.91□□□□□ -0.98
Xcl1P47993 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Xcl1P47993 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Xcl1P47993 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Xcl1P47993 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Xcl1P47993 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Xcl1P47993 Gm45242-201ENSMUST00000210666 2129 ntBASIC8.9□□□□□ -0.98
Xcl1P47993 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Xcl1P47993 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Xcl1P47993 Gm43423-201ENSMUST00000198390 2094 ntBASIC8.9□□□□□ -0.98
Xcl1P47993 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Xcl1P47993 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Xcl1P47993 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Xcl1P47993 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Xcl1P47993 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Xcl1P47993 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Xcl1P47993 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
Xcl1P47993 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Xcl1P47993 Spsb2-203ENSMUST00000112473 1322 ntBASIC8.9□□□□□ -0.98
Xcl1P47993 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Xcl1P47993 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Xcl1P47993 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Xcl1P47993 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.98
Xcl1P47993 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms