Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.25□□□□□ -0.29
BdnfP21237 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
BdnfP21237 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
BdnfP21237 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
BdnfP21237 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
BdnfP21237 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.25□□□□□ -0.29
BdnfP21237 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.25□□□□□ -0.29
BdnfP21237 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
BdnfP21237 Gm38225-201ENSMUST00000194001 393 ntBASIC13.25□□□□□ -0.29
BdnfP21237 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.25□□□□□ -0.29
BdnfP21237 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.25□□□□□ -0.29
BdnfP21237 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
BdnfP21237 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BdnfP21237 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
BdnfP21237 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.24□□□□□ -0.29
BdnfP21237 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
BdnfP21237 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.24□□□□□ -0.29
BdnfP21237 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
BdnfP21237 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.24□□□□□ -0.29
BdnfP21237 Gm13365-201ENSMUST00000121188 973 ntBASIC13.24□□□□□ -0.29
BdnfP21237 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.24□□□□□ -0.29
BdnfP21237 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Rprl2-201ENSMUST00000157150 290 ntBASIC13.24□□□□□ -0.29
BdnfP21237 Gm18737-201ENSMUST00000173594 937 ntBASIC13.24□□□□□ -0.29
BdnfP21237 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
BdnfP21237 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
BdnfP21237 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.24□□□□□ -0.29
BdnfP21237 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.24□□□□□ -0.29
BdnfP21237 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.24□□□□□ -0.29
BdnfP21237 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.24□□□□□ -0.29
BdnfP21237 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
BdnfP21237 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.23□□□□□ -0.29
BdnfP21237 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
BdnfP21237 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.23□□□□□ -0.29
BdnfP21237 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
BdnfP21237 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.23□□□□□ -0.29
BdnfP21237 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.23□□□□□ -0.29
BdnfP21237 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.23□□□□□ -0.29
BdnfP21237 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.23□□□□□ -0.29
BdnfP21237 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
BdnfP21237 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
BdnfP21237 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
BdnfP21237 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
BdnfP21237 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
BdnfP21237 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
BdnfP21237 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms