Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Gm8000-201ENSMUST00000188378 592 ntBASIC11.19□□□□□ -0.62
P06323 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.19□□□□□ -0.62
P06323 Gm5264-201ENSMUST00000190584 848 ntBASIC11.19□□□□□ -0.62
P06323 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.19□□□□□ -0.62
P06323 Gm10175-201ENSMUST00000086013 645 ntBASIC11.19□□□□□ -0.62
P06323 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
P06323 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.19□□□□□ -0.62
P06323 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
P06323 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06323 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
P06323 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.18□□□□□ -0.62
P06323 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
P06323 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.18□□□□□ -0.62
P06323 Gm27494-201ENSMUST00000184735 189 ntBASIC11.18□□□□□ -0.62
P06323 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.18□□□□□ -0.62
P06323 Gm44771-201ENSMUST00000206975 626 ntBASIC11.18□□□□□ -0.62
P06323 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.18□□□□□ -0.62
P06323 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.18□□□□□ -0.62
P06323 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
P06323 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
P06323 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.18□□□□□ -0.62
P06323 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P06323 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06323 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.18□□□□□ -0.62
P06323 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.17□□□□□ -0.62
P06323 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
P06323 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
P06323 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
P06323 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Gm6222-201ENSMUST00000120787 396 ntBASIC11.17□□□□□ -0.62
P06323 Mir1895-201ENSMUST00000122615 79 ntBASIC11.17□□□□□ -0.62
P06323 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 AA543401-201ENSMUST00000164248 1269 ntBASIC11.17□□□□□ -0.62
P06323 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.17□□□□□ -0.62
P06323 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
P06323 AA619741-201ENSMUST00000195095 646 ntBASIC11.17□□□□□ -0.62
P06323 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.17□□□□□ -0.62
P06323 Gm6443-201ENSMUST00000203599 874 ntBASIC11.17□□□□□ -0.62
P06323 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.17□□□□□ -0.62
P06323 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06323 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms