Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.52■□□□□ 0.08
Stx1aO35526 Gm18057-201ENSMUST00000208220 503 ntBASIC15.52■□□□□ 0.08
Stx1aO35526 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Stx1aO35526 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Stx1aO35526 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Stx1aO35526 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Stx1aO35526 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Stx1aO35526 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Stx1aO35526 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.52■□□□□ 0.07
Stx1aO35526 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Stx1aO35526 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.52■□□□□ 0.07
Stx1aO35526 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Stx1aO35526 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Stx1aO35526 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.52■□□□□ 0.07
Stx1aO35526 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Stx1aO35526 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.51■□□□□ 0.07
Stx1aO35526 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Stx1aO35526 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.51■□□□□ 0.07
Stx1aO35526 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.51■□□□□ 0.07
Stx1aO35526 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.51■□□□□ 0.07
Stx1aO35526 Gm38225-201ENSMUST00000194001 393 ntBASIC15.51■□□□□ 0.07
Stx1aO35526 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Stx1aO35526 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.51■□□□□ 0.07
Stx1aO35526 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.51■□□□□ 0.07
Stx1aO35526 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.51■□□□□ 0.07
Stx1aO35526 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Stx1aO35526 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Stx1aO35526 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.51■□□□□ 0.07
Stx1aO35526 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Stx1aO35526 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
Stx1aO35526 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Stx1aO35526 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Stx1aO35526 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.5■□□□□ 0.07
Stx1aO35526 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.5■□□□□ 0.07
Stx1aO35526 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Stx1aO35526 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.5■□□□□ 0.07
Stx1aO35526 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.5■□□□□ 0.07
Stx1aO35526 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Gm18733-201ENSMUST00000173950 856 ntBASIC15.5■□□□□ 0.07
Stx1aO35526 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.5■□□□□ 0.07
Stx1aO35526 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Stx1aO35526 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Stx1aO35526 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Stx1aO35526 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Stx1aO35526 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Stx1aO35526 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Stx1aO35526 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Stx1aO35526 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.49■□□□□ 0.07
Stx1aO35526 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Stx1aO35526 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Stx1aO35526 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Stx1aO35526 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Stx1aO35526 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Stx1aO35526 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Stx1aO35526 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Stx1aO35526 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.49■□□□□ 0.07
Stx1aO35526 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Stx1aO35526 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms